Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A02
(478 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5768E Cluster: PREDICTED: similar to CG8446-PA ... 130 2e-29
UniRef50_UPI0000DB6E9B Cluster: PREDICTED: similar to CG8446-PA ... 106 3e-22
UniRef50_Q8SX78 Cluster: LD22815p; n=4; Diptera|Rep: LD22815p - ... 79 5e-14
UniRef50_Q8VCM4 Cluster: Lipoyltransferase 1, mitochondrial prec... 57 2e-07
UniRef50_Q4SUB6 Cluster: Chromosome 3 SCAF13974, whole genome sh... 52 7e-06
UniRef50_Q9Y234 Cluster: Lipoyltransferase 1, mitochondrial prec... 51 2e-05
UniRef50_UPI00006CB5AD Cluster: lipoyltransferase and lipoate-pr... 37 0.27
UniRef50_A3YEF6 Cluster: ATP-dependent helicase HrpA; n=1; Marin... 36 0.35
UniRef50_A6VYA9 Cluster: ATP-dependent helicase HrpA; n=2; Gamma... 36 0.61
UniRef50_Q22C73 Cluster: Biotin/lipoate A/B protein ligase famil... 35 0.81
UniRef50_O13629 Cluster: LIPOATE-PROTEIN LIGASE A; n=1; Schizosa... 35 0.81
UniRef50_Q4P8A2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_UPI0000D57489 Cluster: PREDICTED: similar to CG15437-PA... 34 1.4
UniRef50_A5JZD5 Cluster: Lipoate-protein ligase, putative; n=6; ... 34 1.9
UniRef50_Q892P8 Cluster: Lipoate-protein ligase A; n=2; Clostrid... 33 4.3
UniRef50_Q830N7 Cluster: Lipoate-protein ligase A; n=36; Firmicu... 33 4.3
UniRef50_Q6LHJ0 Cluster: Hypothetical lipoate-protein ligase A; ... 33 4.3
UniRef50_Q01804 Cluster: OTU domain-containing protein 4; n=32; ... 33 4.3
UniRef50_Q10ZT3 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_UPI000023E36F Cluster: hypothetical protein FG01642.1; ... 32 7.5
UniRef50_Q7YSU9 Cluster: CHH-like protein; n=1; Procambarus clar... 32 7.5
UniRef50_O45303 Cluster: Putative uncharacterized protein gip-2;... 32 7.5
UniRef50_Q5KMI3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.5
UniRef50_A5DXT7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.5
UniRef50_Q5V224 Cluster: Phosphate ABC transporter permease prot... 32 7.5
UniRef50_Q82462 Cluster: Coat protein; n=23; Omegatetravirus|Rep... 31 10.0
UniRef50_Q88U17 Cluster: Lipoate-protein ligase; n=30; Bacteria|... 31 10.0
UniRef50_A0BZP9 Cluster: Chromosome undetermined scaffold_14, wh... 31 10.0
>UniRef50_UPI0000D5768E Cluster: PREDICTED: similar to CG8446-PA
isoform 2; n=2; Endopterygota|Rep: PREDICTED: similar to
CG8446-PA isoform 2 - Tribolium castaneum
Length = 389
Score = 130 bits (313), Expect = 2e-29
Identities = 63/152 (41%), Positives = 96/152 (63%)
Frame = +3
Query: 15 LISKQRGFQFVNPTDDWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSKVY 194
L ++Q+GFQ VNPT+ WFPG+ ++++ LQ W W +GKTP FT+SR+F VP +++
Sbjct: 252 LANQQKGFQMVNPTEKWFPGIEEIRDNLQGWQWRFGKTPKFTISRSFTVPEHLIS----Q 307
Query: 195 SATQELVITMTVEKGLINDVTLNIPPGLVESGFHGEASVITHLKGKRFTAEALNALQEAM 374
+L +TM VE G I+DV L +PPGLV +GF G +VIT L G +F+ EAL+ L+ ++
Sbjct: 308 DVPDDLKVTMVVEGGKISDVNLYVPPGLVANGFSGNVNVITSLIGHKFSEEALDNLEWSL 367
Query: 375 LTRHVTX*TSKQVGTTKQQFVAKCFDQVVNTM 470
+G+ K +FV C QV+ ++
Sbjct: 368 ----------GALGSDKDKFVTDCVKQVMQSV 389
>UniRef50_UPI0000DB6E9B Cluster: PREDICTED: similar to CG8446-PA
isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG8446-PA isoform 2 - Apis mellifera
Length = 369
Score = 106 bits (254), Expect = 3e-22
Identities = 51/135 (37%), Positives = 83/135 (61%)
Frame = +3
Query: 9 QNLISKQRGFQFVNPTDDWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSK 188
Q+ I Q+GFQ++NPT+DWFPGL L +E +SW+W YGKTP FTV+R + + +K
Sbjct: 233 QDHIQYQKGFQYINPTEDWFPGLNKLISEFRSWEWNYGKTPKFTVTRVLDM---VTRNNK 289
Query: 189 VYSATQELVITMTVEKGLINDVTLNIPPGLVESGFHGEASVITHLKGKRFTAEALNALQE 368
V+ +T+ ++ G+I ++ + +P LV F +ASVIT+L+G R+ E + +
Sbjct: 290 VH----RFNLTLEIQNGIIEEIKMRLPASLVAEDFSQDASVITNLRGSRYNHEIMENIIT 345
Query: 369 AMLTRHVTX*TSKQV 413
+ + VT TS+ +
Sbjct: 346 TIGCKTVTLSTSQNI 360
>UniRef50_Q8SX78 Cluster: LD22815p; n=4; Diptera|Rep: LD22815p -
Drosophila melanogaster (Fruit fly)
Length = 396
Score = 79.0 bits (186), Expect = 5e-14
Identities = 41/117 (35%), Positives = 63/117 (53%)
Frame = +3
Query: 24 KQRGFQFVNPTDDWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSKVYSAT 203
+QRGFQ VNPT+ WFPG+ +L++ SWDW GKTP FTV + V +
Sbjct: 278 QQRGFQLVNPTEKWFPGIEELRSNYSSWDWVIGKTPKFTVQKELEVKGD--------EQD 329
Query: 204 QELVITMTVEKGLINDVTLNIPPGLVESGFHGEASVITHLKGKRFTAEALNALQEAM 374
+L +++ VE GL+ ++ + +P V+T L+GK + E LN + A+
Sbjct: 330 MKLKLSVEVEAGLMKEIGIQLPQS------DQLVPVVTPLQGKPYNEENLNGILGAL 380
>UniRef50_Q8VCM4 Cluster: Lipoyltransferase 1, mitochondrial
precursor; n=4; Amniota|Rep: Lipoyltransferase 1,
mitochondrial precursor - Mus musculus (Mouse)
Length = 373
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 45 VNPTDD-WFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSKVYSATQELVIT 221
+NP D+ FPG+ ELQSW+W YG+TP FTV TF VP E A E+ +
Sbjct: 248 INPADETMFPGINRKVKELQSWEWVYGRTPKFTVDTTFHVPYE--------QAHLEIQVF 299
Query: 222 MTVEKGLINDVTLNIP 269
M V+ G I + P
Sbjct: 300 MDVKNGRIETCAIKAP 315
>UniRef50_Q4SUB6 Cluster: Chromosome 3 SCAF13974, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF13974, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 365
Score = 52.0 bits (119), Expect = 7e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 42 FVNPTD-DWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSKVYSATQELVI 218
FV+P D FPGL EL+SW+W +GKTP F+V T +++ + + L
Sbjct: 260 FVDPDDKSAFPGLTQTAAELRSWEWMFGKTPQFSVQATL----DLVEDGSLAHGSGRL-- 313
Query: 219 TMTVEKGLINDVTLNIP 269
MT++KG+I L++P
Sbjct: 314 RMTIKKGVIESCELDVP 330
>UniRef50_Q9Y234 Cluster: Lipoyltransferase 1, mitochondrial
precursor; n=14; Eumetazoa|Rep: Lipoyltransferase 1,
mitochondrial precursor - Homo sapiens (Human)
Length = 373
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 45 VNPTDDW-FPGLADLKNELQSWDWCYGKTPIFTVSRTFPV 161
+NPTD+ FPG+ ELQ+W+W YGKTP F+++ +F V
Sbjct: 248 INPTDETLFPGINSKAKELQTWEWIYGKTPKFSINTSFHV 287
>UniRef50_UPI00006CB5AD Cluster: lipoyltransferase and
lipoate-protein ligase containing protein; n=1;
Tetrahymena thermophila SB210|Rep: lipoyltransferase and
lipoate-protein ligase containing protein - Tetrahymena
thermophila SB210
Length = 389
Score = 36.7 bits (81), Expect = 0.27
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 69 PGLADLKNELQSWDWCYGKTPIFT 140
P + ++ EL+SWDW YG TP FT
Sbjct: 277 PKIKEIYTELKSWDWIYGHTPQFT 300
>UniRef50_A3YEF6 Cluster: ATP-dependent helicase HrpA; n=1;
Marinomonas sp. MED121|Rep: ATP-dependent helicase HrpA
- Marinomonas sp. MED121
Length = 1328
Score = 36.3 bits (80), Expect = 0.35
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 117 YGKTPIFTVS-RTFPVPAEILAPSKVYSATQELVITMTVEKGLINDVTLNIPPGLVESGF 293
+ P+F VS RTFPV P + S ++E+ ++E+G+++ V I + S F
Sbjct: 227 FNDAPVFEVSGRTFPVEIRY-QPLLLKSDSEEVDADQSMEQGIVDAVHTIIHEEKLSS-F 284
Query: 294 HGEASVITHLKGKRFTAEALNALQEAMLTRHVTX*TSKQVGTTKQQFVAK 443
G + ++ L G+R E L+ L ++ +++QQ + K
Sbjct: 285 RGASDILVFLPGEREIRETAELLRREELRHTEVVPLYARLSSSEQQKIFK 334
>UniRef50_A6VYA9 Cluster: ATP-dependent helicase HrpA; n=2;
Gammaproteobacteria|Rep: ATP-dependent helicase HrpA -
Marinomonas sp. MWYL1
Length = 1308
Score = 35.5 bits (78), Expect = 0.61
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +3
Query: 117 YGKTPIFTVS-RTFPVPAEILAPSKVYSATQELVITMTVEKGLINDVTLNIPPGLVESGF 293
+ PI VS RT+PV P S ++EL ++E+G+++ V L I +SG+
Sbjct: 246 FENAPIIEVSGRTYPVEIRY-QPLLSKSDSEELDEDQSMEQGILDAVELLIAEER-QSGY 303
Query: 294 HGEASVITHLKGKRFTAEALNALQEAMLTRHVTX*TSKQVGTTKQQFVAK 443
G ++ L G+R + L+ A L ++ ++QQ + K
Sbjct: 304 RGAGDILVFLPGEREIRDTAEILRRAELRSTEVLPLYARLSASEQQRIFK 353
>UniRef50_Q22C73 Cluster: Biotin/lipoate A/B protein ligase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Biotin/lipoate A/B protein ligase family protein -
Tetrahymena thermophila SB210
Length = 394
Score = 35.1 bits (77), Expect = 0.81
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 9 QNLISKQRGFQFVNPTDDWFPGLADLKNELQSWDWCYGKTPIF 137
QN I+K F++ ++ P + + NE +SW+W YGKTP F
Sbjct: 262 QNCITKH--FEYKTMINE--PFIKEQINEFKSWEWMYGKTPKF 300
>UniRef50_O13629 Cluster: LIPOATE-PROTEIN LIGASE A; n=1;
Schizosaccharomyces pombe|Rep: LIPOATE-PROTEIN LIGASE A
- Schizosaccharomyces pombe (Fission yeast)
Length = 363
Score = 35.1 bits (77), Expect = 0.81
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 69 PGLADLKNELQSWDWCYGKTPIF 137
P + NELQSW+W +G+TP F
Sbjct: 264 PSILKAVNELQSWEWTFGQTPSF 286
>UniRef50_Q4P8A2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 466
Score = 34.7 bits (76), Expect = 1.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 90 NELQSWDWCYGKTPIFT 140
+ELQSWDW +G+TP FT
Sbjct: 337 DELQSWDWVFGQTPEFT 353
>UniRef50_UPI0000D57489 Cluster: PREDICTED: similar to CG15437-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG15437-PA - Tribolium castaneum
Length = 392
Score = 34.3 bits (75), Expect = 1.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 119 RKNANLYREPNVSGSCRDTCTIKSLLCHSRTGYY 220
RKN + P ++G+ R++C I + CH+ GYY
Sbjct: 19 RKNGDKEVHPKINGNRRNSCAIVTNTCHTCNGYY 52
>UniRef50_A5JZD5 Cluster: Lipoate-protein ligase, putative; n=6;
Plasmodium|Rep: Lipoate-protein ligase, putative -
Plasmodium vivax
Length = 423
Score = 33.9 bits (74), Expect = 1.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 90 NELQSWDWCYGKTPIF 137
N L+ WDWCYGK+P F
Sbjct: 325 NLLKDWDWCYGKSPKF 340
>UniRef50_Q892P8 Cluster: Lipoate-protein ligase A; n=2;
Clostridia|Rep: Lipoate-protein ligase A - Clostridium
tetani
Length = 332
Score = 32.7 bits (71), Expect = 4.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 75 LADLKNELQSWDWCYGKTPIFTVS 146
L +L+N+ SW+W +G+TP F ++
Sbjct: 227 LIELQNKYSSWEWLFGETPEFEIN 250
>UniRef50_Q830N7 Cluster: Lipoate-protein ligase A; n=36;
Firmicutes|Rep: Lipoate-protein ligase A - Enterococcus
faecalis (Streptococcus faecalis)
Length = 334
Score = 32.7 bits (71), Expect = 4.3
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 99 QSWDWCYGKTPIFTVSR--TFPVPAEILAPSKVYSATQELVI 218
++WDW YGK+P F + R FP+ + + + A QE+ I
Sbjct: 240 RNWDWNYGKSPAFNLERRHRFPIGSIEMKMNVADGAIQEIKI 281
>UniRef50_Q6LHJ0 Cluster: Hypothetical lipoate-protein ligase A;
n=2; Photobacterium profundum|Rep: Hypothetical
lipoate-protein ligase A - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 331
Score = 32.7 bits (71), Expect = 4.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 45 VNPTDDWFPGLADLKNELQSWDWCYGKTPIF 137
+NP + PGL + + SWDW YG++P F
Sbjct: 216 INPLPN-LPGLGKKLHVISSWDWNYGQSPEF 245
>UniRef50_Q01804 Cluster: OTU domain-containing protein 4; n=32;
Eumetazoa|Rep: OTU domain-containing protein 4 - Homo
sapiens (Human)
Length = 1114
Score = 32.7 bits (71), Expect = 4.3
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 95 VAKLGLVLRKNANLYREPNVSGS--CRDTCTIKSLLCHSRTGYYYD 226
++ L L+ RK+ +YREPNVS S + K LLC S G +YD
Sbjct: 106 ISALSLMYRKDFIIYREPNVSPSQVTENNFPEKVLLCFS-NGNHYD 150
>UniRef50_Q10ZT3 Cluster: Putative uncharacterized protein; n=1;
Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein - Trichodesmium erythraeum
(strain IMS101)
Length = 252
Score = 32.3 bits (70), Expect = 5.7
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 84 LKNELQSWDWCYGKTPIFTVSRTFPVPAEIL-APSKVYSATQELVITMTVEKGLINDVTL 260
++N+ Q+ +PI RT +EI A K + + ++ + + LI + +
Sbjct: 1 MENQNQTEQTSEANSPIPLERRT-KAQSEIYDAFEKFIFSNETKILAKLIARTLIFEQII 59
Query: 261 NIPPGLVESGFHGEASVITHLKGKRFTAEALNALQEAM 374
N+P +VE+G + + ++T LK K+ A NAL++ +
Sbjct: 60 NVPGDIVEAGVYRGSGMLTWLKLKKILAP--NALKKVI 95
>UniRef50_UPI000023E36F Cluster: hypothetical protein FG01642.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01642.1 - Gibberella zeae PH-1
Length = 399
Score = 31.9 bits (69), Expect = 7.5
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 90 NELQSWDWCYGKTPIFTVS 146
+ELQS DW YG+TP FT S
Sbjct: 287 DELQSRDWIYGQTPRFTFS 305
>UniRef50_Q7YSU9 Cluster: CHH-like protein; n=1; Procambarus
clarkii|Rep: CHH-like protein - Procambarus clarkii (Red
swamp crayfish)
Length = 68
Score = 31.9 bits (69), Expect = 7.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 101 KLGLVLRKNANLYREPNVSGSCRDTC 178
KL LV NLYR+P V+ +CRD C
Sbjct: 14 KLELVCDDCYNLYRKPKVATTCRDNC 39
>UniRef50_O45303 Cluster: Putative uncharacterized protein gip-2;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein gip-2 - Caenorhabditis elegans
Length = 289
Score = 31.9 bits (69), Expect = 7.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 75 LADLKNELQSWDWCYGKTPIFTVSR 149
++ + +EL++W W YGK+P F SR
Sbjct: 241 ISKIFDELKAWKWIYGKSPKFQYSR 265
>UniRef50_Q5KMI3 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 396
Score = 31.9 bits (69), Expect = 7.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 93 ELQSWDWCYGKTPIFT 140
EL+SW+W YG+TP FT
Sbjct: 287 ELKSWEWQYGQTPEFT 302
>UniRef50_A5DXT7 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 496
Score = 31.9 bits (69), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 81 DLKNELQSWDWCYGKTPIFT 140
D EL+ W+W YG TP FT
Sbjct: 390 DTAKELKQWEWIYGHTPPFT 409
>UniRef50_Q5V224 Cluster: Phosphate ABC transporter permease
protein; n=1; Haloarcula marismortui|Rep: Phosphate ABC
transporter permease protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 566
Score = 31.9 bits (69), Expect = 7.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 282 ESGFHGEASVITHLKGKRFTAEALNA 359
E+G+HGE S + HL+G+ F A L A
Sbjct: 7 ETGWHGENSDVNHLRGRAFEATCLAA 32
>UniRef50_Q82462 Cluster: Coat protein; n=23; Omegatetravirus|Rep:
Coat protein - Helicoverpa armigera stunt virus
Length = 647
Score = 31.5 bits (68), Expect = 10.0
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +3
Query: 12 NLISKQRGFQFVNPTDDWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPS-K 188
N+ +K+ VN +W LAD + + S W FT T+ V +L P+
Sbjct: 172 NVENKEMSLDVVNDLIEWLNNLADWRYVVDSEQWIN-----FTNDTTYYVRIRVLRPTYD 226
Query: 189 VYSATQELVITMTVEKGLINDVTLNI-PPGLVESGF 293
V T+ LV T++ + +T P LV+ GF
Sbjct: 227 VPDPTEGLVRTVSDYRLTYKAITCEANMPTLVDQGF 262
>UniRef50_Q88U17 Cluster: Lipoate-protein ligase; n=30;
Bacteria|Rep: Lipoate-protein ligase - Lactobacillus
plantarum
Length = 336
Score = 31.5 bits (68), Expect = 10.0
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 72 GLADLKNE-LQSWDWCYGKTPIFTVSR 149
G+A L + +WDW YG++P FTV +
Sbjct: 230 GVAALNQQYFTNWDWIYGQSPAFTVKQ 256
>UniRef50_A0BZP9 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 342
Score = 31.5 bits (68), Expect = 10.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 9 QNLISKQRGFQFVNPTDDWFPGLADLKNE---LQSWDWCYGKTPIFTVS 146
+ I K +F D + ++K E L SW+W Y TP FTV+
Sbjct: 212 KEFIKKYNDVEFKEFNSDQLLNIEEVKKESERLSSWEWLYQYTPQFTVN 260
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,542,696
Number of Sequences: 1657284
Number of extensions: 9490401
Number of successful extensions: 22661
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22654
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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