Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P23
         (240 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066647-1|AAH66647.1| 1457|Homo sapiens KIAA0586 protein protein.     28   6.1  
BC000900-1|AAH00900.1|  347|Homo sapiens KIAA0586 protein protein.     28   6.1  
AY359881-1|AAQ63404.1| 1504|Homo sapiens KIAA0586 isoform protein.     28   6.1  
AB011158-1|BAA25512.2| 1576|Homo sapiens KIAA0586 protein protein.     28   6.1  
AL591594-3|CAI14038.1|  871|Homo sapiens chromosome 1 open readi...    27   8.0  

>BC066647-1|AAH66647.1| 1457|Homo sapiens KIAA0586 protein protein.
          Length = 1457

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/41 (24%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 81   LICIFNYAVSIALSAPNIPPAR-DIVIHKIEMFGCNINITI 200
            L C+F+   ++ LSA  +PPA+  +++  + +  C+ ++++
Sbjct: 1402 LTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSL 1442


>BC000900-1|AAH00900.1|  347|Homo sapiens KIAA0586 protein protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/41 (24%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 81  LICIFNYAVSIALSAPNIPPAR-DIVIHKIEMFGCNINITI 200
           L C+F+   ++ LSA  +PPA+  +++  + +  C+ ++++
Sbjct: 292 LTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSL 332


>AY359881-1|AAQ63404.1| 1504|Homo sapiens KIAA0586 isoform protein.
          Length = 1504

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/41 (24%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 81   LICIFNYAVSIALSAPNIPPAR-DIVIHKIEMFGCNINITI 200
            L C+F+   ++ LSA  +PPA+  +++  + +  C+ ++++
Sbjct: 1449 LTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSL 1489


>AB011158-1|BAA25512.2| 1576|Homo sapiens KIAA0586 protein protein.
          Length = 1576

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/41 (24%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 81   LICIFNYAVSIALSAPNIPPAR-DIVIHKIEMFGCNINITI 200
            L C+F+   ++ LSA  +PPA+  +++  + +  C+ ++++
Sbjct: 1521 LTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSL 1561


>AL591594-3|CAI14038.1|  871|Homo sapiens chromosome 1 open reading
           frame 101 protein.
          Length = 871

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 218 TRQDTTDCYVDITSKHFNFMYYYVARRWNV 129
           T  D  + Y+ + S H  F++YY  R W +
Sbjct: 74  TGPDEEERYLFVESSHTCFLWYYRVRTWRI 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,596,651
Number of Sequences: 237096
Number of extensions: 594679
Number of successful extensions: 838
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)