Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P22
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 33 0.017
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.030
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 30 0.21
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 0.36
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 29 0.36
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 29 0.48
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 27 1.1
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 1.9
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 26 2.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 3.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 4.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 4.5
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 25 4.5
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 5.9
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 25 5.9
SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr 1|||... 25 5.9
SPBC3B8.08 |||Sjogren's syndrome/scleroderma autoantigen 1 famil... 25 5.9
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 25 7.8
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 25 7.8
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 25 7.8
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 33.5 bits (73), Expect = 0.017
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 43 LSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQ--QNKAVSSSNSNT 216
LSG N++ +N+ SG N +S ++NQ Q S+ Q + ++SS+ N+
Sbjct: 549 LSGMASSFLGSSGNNNNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNS 608
Query: 217 NTYAGYNSGLNADV--NNQIEYTDN 285
N YN+ N + NN Y +N
Sbjct: 609 NKQ-NYNNNNNQNYGNNNNQNYNNN 632
Score = 28.3 bits (60), Expect = 0.64
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 76 DSQNSHLSNAYSGFNTNAHSTSSNQHR---YQFKSNEQQNKAVSSSNSNTNTYAGYNSGL 246
+S + + +N SG N H SS+ + F ++ N + N+N N G N+
Sbjct: 568 NSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQ 627
Query: 247 NADVNN 264
N + NN
Sbjct: 628 NYNNNN 633
Score = 27.1 bits (57), Expect = 1.5
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +1
Query: 31 SQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQH---RYQFKSNEQQNKAVSS 201
S A +SG S NS+ SN S + N +TS+N+ + S + SS
Sbjct: 501 SAAAVSGLIGSFMGSSSNNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMASSFLGSS 560
Query: 202 SNSN--TNTYAGYNSGLNADVNNQ 267
N+N N+ +G + N+ NNQ
Sbjct: 561 GNNNNNNNSNSGNYNNNNSGNNNQ 584
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 32.7 bits (71), Expect = 0.030
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 88 SHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADVN 261
S L+N+ +G+ +N +SSN + +V +NS TN+ +NS +A N
Sbjct: 116 SSLANSVTGYASNYTQSSSNSTSTMNSTGSVSGGSVYPTNSTTNSSISWNSSTSAATN 173
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 29.9 bits (64), Expect = 0.21
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +1
Query: 46 SGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQ 183
S +Q + ++ L+N Y+ N + +N+H++++ N Q
Sbjct: 4 SARQLSVAEQNGESGRLNNGYTSNNIQQYKDETNRHQFEYNQNRNQ 49
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.1 bits (62), Expect = 0.36
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 28 DSQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSS 201
DS++ S + DST+ S + S++ G N+N +T+S + Q +N ++ +S
Sbjct: 289 DSESESSSEDSDSTSSSSDSDSSSSSEDG-NSNTDTTTSGEVSAQSSTNSTSSEESTS 345
Score = 25.4 bits (53), Expect = 4.5
Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 28 DSQAHLSGQQYDSTAIDSQN-----SHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKA 192
DS++ S + DS++ S + S S++ S + + +SS+ + +S+ + + +
Sbjct: 242 DSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDS 301
Query: 193 VSSSNSNTNTYAGYNSGLNADVNNQIE 273
SSS+ + ++ + + N D E
Sbjct: 302 TSSSSDSDSSSSSEDGNSNTDTTTSGE 328
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 29.1 bits (62), Expect = 0.36
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 122 PTHIPLRLINTGINSNPMNNKTKQYLVQIPTQIRTLVITQV*MLM*ITKSNIQITNQKA 298
P HIPL ++ G+N N +K L Q T + ++ L+ I +S+I + +++
Sbjct: 253 PMHIPLGVLTVGLNKYSWRNVSKHILQQAATVKNADNLAEI--LLSINQSSIPLIQERS 309
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 28.7 bits (61), Expect = 0.48
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 82 QNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADV 258
QN N S FN+++HS + + ++ S N++ ++Y N N DV
Sbjct: 301 QNGRALNYVSSFNSDSHSPKDYISQSYTNEPGLKKESADSFNNSIDSYISPNQSPNTDV 359
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 27.5 bits (58), Expect = 1.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +1
Query: 76 DSQNSHLSNA--YSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSN-SNTNTYAGYNS-- 240
+S ++ +NA YS T A+S SSN + SN + + N ++N Y Y +
Sbjct: 21 ESNSNTATNAPSYSVGGTTANSYSSNSYNDNNNSNSTYGSSNNYGNYGSSNNYGSYGASN 80
Query: 241 --GLNADVNNQIEY 276
G N NN Y
Sbjct: 81 TYGSNGSSNNYGNY 94
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.6 bits (56), Expect = 1.9
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 82 QNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAG 231
Q S Y +TN SN FK N N ++S + + YAG
Sbjct: 118 QQEAQSEVYQRASTNTQQQVSNVSHGNFKPNSSVNTEPNTSILSNSKYAG 167
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 2.6
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 76 DSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNT 222
D N+ LSN+ F S +N H + +SN K + + +T++
Sbjct: 250 DEDNNDLSNSKQIFQQMRRSLGANSHFIRLRSNYISAKPLDTDRYDTSS 298
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 3.4
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 31 SQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNS 210
S + S S++ S + S++ S +++ S+SS++ S++ +K SSS+
Sbjct: 168 SSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSK-FSSSSF 226
Query: 211 NTNTYAGYNSGLNADVNN 264
T+T +S A V+N
Sbjct: 227 ITSTTPASSSSSGAIVSN 244
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 4.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 97 SNAYSGFNTNAHSTS-SNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLN 249
S A SG +T ++++S SN+ + S ++ +S+ + N Y+ Y G N
Sbjct: 274 SPALSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYSHYQHGFN 325
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 4.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 64 STAIDSQNSHLSNAYSGFN--TNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYN 237
STA + + S A S N T+A +TSS+ ++ + SSS ++T + +
Sbjct: 183 STAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 242
Query: 238 SGLNADVNNQIEYTDN 285
S +++ V++ T +
Sbjct: 243 SSISSTVSSSTPLTSS 258
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.4 bits (53), Expect = 4.5
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 64 STAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGY 234
ST+ ++N + +G T A + +S HR +N Q N + SNSN + + +
Sbjct: 177 STSNSTRNGTSAATSNGTGTGAGTGAS--HRSSPVTNRQTNNTSALSNSNAHIMSSF 231
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.0 bits (52), Expect = 5.9
Identities = 19/91 (20%), Positives = 37/91 (40%)
Frame = +1
Query: 10 TRELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNK 189
++++ D + G D+ AIDS T ++S NQ + FKS+E +
Sbjct: 1643 SKDIDADEDLEIIGSS-DNKAIDSNGEGFLIEKDNIGTGSYS---NQQSFDFKSSESDSF 1698
Query: 190 AVSSSNSNTNTYAGYNSGLNADVNNQIEYTD 282
S + + + ++ + N+ Y D
Sbjct: 1699 PQKSPSVESFSIIDNDNPFHEGQNSSTGYKD 1729
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 184 NKAVSSSNSNTNTYAGYNSGLNADVNNQIEYTDN 285
N + SS++ ++ + ++S N D+N I++T+N
Sbjct: 157 NVSFPSSSTPPSSDSNFSSIQNTDLNTSIKFTEN 190
>SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 5.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 384 PRISKVNCCRRKSRYMVIASIWYSFP 461
PR S VN CR RYM + W P
Sbjct: 54 PRESTVNHCRECERYMQPPNNWMIAP 79
>SPBC3B8.08 |||Sjogren's syndrome/scleroderma autoantigen 1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 153
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 361 PVGGVNDAQESQK*TAAAGNLGTWSSHQ 444
P+ NDA+ SQ+ T A T SSHQ
Sbjct: 73 PISKTNDAERSQQTTKAPVMERTESSHQ 100
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 7.8
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 16 ELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGF--NTNAHSTSSNQHRYQFKSNEQQNK 189
E EDS+ +G Q DS + + A A S + FK++ QQN
Sbjct: 202 ENMEDSEDESNGPQADSIMYEDFFGPKTAAGRRELKKKKAESKRKRTSKPDFKNDVQQNV 261
Query: 190 AVSSSNSNTNTYAGYN 237
++ S+ N YA ++
Sbjct: 262 IEENNESSDNEYATFD 277
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +1
Query: 13 RELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKA 192
+++ S A ++++ +++ S L+ +G +T+ S++SN Q +QN
Sbjct: 20 KDVVLSSNAQTDEKRFEEPSLEVGGS-LAKVENGLSTSISSSASNLEGQQAPFFTKQNSC 78
Query: 193 VSSSNSNTNTY 225
+S TY
Sbjct: 79 LSRFRELAQTY 89
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 24.6 bits (51), Expect = 7.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 22 YEDSQ--AHLSGQQYDSTAIDSQNSH-LSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKA 192
++DS+ AH+ D+ A + L S NTNA+S +SN SN + +
Sbjct: 630 FDDSRPPAHIKLVSSDTQATTELGFNGLVQQVSENNTNAYSATSNSQLSSIFSNLSSSIS 689
Query: 193 VSSSN 207
+SSN
Sbjct: 690 DASSN 694
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.123 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,906,453
Number of Sequences: 5004
Number of extensions: 36644
Number of successful extensions: 105
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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