Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P20
(624 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 109 2e-25
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 5e-04
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.005
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 35 0.008
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 34 0.015
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 31 0.18
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 27 1.7
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 26 3.8
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 3.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 3.8
SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine decarboxylase|Schizo... 25 6.7
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 25 6.7
SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces... 25 6.7
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 6.7
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 6.7
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 25 6.7
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 8.9
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 109 bits (263), Expect = 2e-25
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Frame = +2
Query: 197 DNEIER--LDALDSGDLEAIRQQRLAEMKKRAKQRQDWLANGHGEYTEIEGEKEFFSACN 370
D+E+E LD D A R+QRL +KK + + GH ++ +E E+E
Sbjct: 92 DSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDFTL 151
Query: 371 ASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLA 550
+S+ +V HFY D RCKI+D H++++A H ET+FI+++ APFL +L ++V+P +
Sbjct: 152 SSKKVVIHFYHPDFIRCKIIDSHLEKIAKVHWETKFIRIEAANAPFLVVKLGLKVLPAVL 211
Query: 551 LVNGNKTKDFVVGFTDLGNRDDF 619
++ D ++GF DLGN+DDF
Sbjct: 212 CYVNSQLVDKIIGFADLGNKDDF 234
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 332 EIEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFL 511
++ EF S + +V F+ T CK + +Q + + + FIK+DVD+ +
Sbjct: 4 QVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEI 63
Query: 512 TGRLNVRVIPTLALV-NGNKTKDFV 583
V +P+ L NG K ++ V
Sbjct: 64 AAEAGVHAMPSFFLYKNGEKIEEIV 88
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.9 bits (79), Expect = 0.005
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 332 EIEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFI--KLDVDRAP 505
EI + + S S L Y CK + QLA+K+ +F+ K++VD
Sbjct: 5 EIRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQR 64
Query: 506 FLTGRLNVRVIPTLALVNGNKTKDFVVG 589
+ L V+ +PT K D + G
Sbjct: 65 QIASGLGVKAMPTFVFFENGKQIDMLTG 92
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 35.1 bits (77), Expect = 0.008
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 161 LQHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLAEMKKRAKQRQDWLANGHGEYTEIE 340
L H + K LD E D D L+ R +R+ E K + + + G I
Sbjct: 40 LAHENRLENKDLDELAELEDEEDDEFLQMYRNKRMQEWKDQMSKAK------FGSVYPIS 93
Query: 341 GEKEFFSACNASENL--VCHFYKTDSPRCKILDMHMKQLATKHIETRFIKL 487
+ +AS+ + V H ++ P CK+L +++LA + + +F+K+
Sbjct: 94 KPEYTAEVTDASKEVFVVVHMFQDSLPACKLLAAILERLAPMYPQIKFVKI 144
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +2
Query: 335 IEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLT 514
+E ++ + +A + V FY CK L +++L+ ++ + FI ++ D+ +
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIA 81
Query: 515 GRLNVRVIPTLALVNGNKTKDFVVG 589
+ V +PT+ L + D +VG
Sbjct: 82 QKNGVYALPTMVLFRKGQELDRIVG 106
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 323 EYTEIEGEKEFFSACNASENLVC-HFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDR 499
E T +E +E N E ++ +FY + CK ++ Q A F+K++ ++
Sbjct: 4 EITFVEQFQEILQ--NGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEK 61
Query: 500 APFLTGRLNVRVIPTLALVNGNK 568
+ +V +P L++G K
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAK 84
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 140 GASMEQVLQHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLAEMKKRAK 289
G ++ +L H + + +++ E LDA++ L R+ +LAE+ RA+
Sbjct: 146 GPNLNNLLDHWLRHIRDVIEDNREELDAIEDPQL---RRLKLAELNTRAQ 192
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 556 HERKRRDHADIQSPCEEGRSINVQLDESS 470
H RK RDH D QS R N D+ S
Sbjct: 367 HRRKERDHRDDQSSFRNERFSNYYGDDRS 395
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 3.8
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +2
Query: 185 EKQLDNEIERLDALDSGDL-EAIRQQRLAEMKKRAKQRQDWLANGHGEYTEIEGEKEFFS 361
+K ++ ++ + SGD AI++ EM KRA N Y ++ E
Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEY--TEMTKRAPSDPRGFGNRAAAYLKVMAPAECIR 454
Query: 362 ACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVI 538
CN + L +F K + + L M +K K I+ +VDR TG+ N+R I
Sbjct: 455 DCNKAIELDPNFAKAYVRKAQALFM-LKDY-NKCIDACNEASEVDRREPNTGK-NLREI 510
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 615 SSRLPRSVNPTTKSLVLFPFTSASVGITRTFSRPVRKGALSTSSL 481
S+ S +PT+ SL TS+S+ + T S + ++++SSL
Sbjct: 95 STNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSL 139
>SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine
decarboxylase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 437
Score = 25.4 bits (53), Expect = 6.7
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 GASMEQVLQHVAQTVEKQLDNE----IERLDALDSGD-LEAIRQQRLAEMKKRAKQRQDW 304
G +EQV + + +++ L +E ++R A+ S D + IRQ+ A++ QD
Sbjct: 168 GGQLEQV-KGITYSLDALLGDEKLARLKRSHAIPSPDHIPHIRQEEFAKLNGIHYSLQDL 226
Query: 305 LANGHGE 325
+ + HGE
Sbjct: 227 MGHDHGE 233
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 25.4 bits (53), Expect = 6.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 493 NVQLDESSLDVFGRELLHVHVEDLAARRVRLVEMADE 383
NVQL E S+ ++ ++L + E RRV E A E
Sbjct: 139 NVQLPEISMPLWLEKILRLDEESAERRRVLQAERAKE 175
>SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 106 RQIRCLTHCKVTLKQNSLYFYRIHISPIKTNAPR 5
RQ C +VTL+ ++ Y+++ + P +T+ P+
Sbjct: 107 RQPLCWQDLQVTLQVDNAYYHQPQLKPDQTSYPK 140
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 254 QQRLAEMKKRAKQRQDWLANGHGEYTEIEGEKEFFSACNASEN 382
+QRL E++KR + R++ ++N Y + + + S+N
Sbjct: 111 EQRLEEIRKRNQSRKNQMSNNSTTYHRETKRRNINAEASTSDN 153
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 220 VQSFNFIVQLFLNSLSD 170
+QS F++ LFLNSL D
Sbjct: 1236 LQSLQFVLPLFLNSLGD 1252
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -3
Query: 475 SSLDVFGRELLHVHVEDLAARRVRLVEMADEVLARVASGE 356
S+L+ REL+ +E LAA +R++ +A +V+ + + E
Sbjct: 536 STLEEPDRELIIAQMETLAAEGLRVLALATKVIDKADNWE 575
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.0 bits (52), Expect = 8.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 571 SLVSIHERKRRDHADIQS 518
SLVSI RK+RD A I+S
Sbjct: 197 SLVSIPSRKKRDEAFIES 214
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,105,202
Number of Sequences: 5004
Number of extensions: 37994
Number of successful extensions: 160
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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