Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P20
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 164 4e-41
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 40 0.001
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 40 0.001
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 40 0.001
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 40 0.001
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 33 0.13
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 33 0.13
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 33 0.22
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 32 0.38
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 31 0.88
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 31 0.88
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 6.2
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 28 6.2
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 6.2
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 27 8.2
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 27 8.2
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 164 bits (399), Expect = 4e-41
Identities = 76/157 (48%), Positives = 112/157 (71%)
Frame = +2
Query: 152 EQVLQHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLAEMKKRAKQRQDWLANGHGEYT 331
EQ+L+ AQ VE+Q+D E+ +L+ L+ DLE IR+QR+ +MKK K R + L++GHG+Y
Sbjct: 11 EQLLR-AAQVVEEQIDQEMNKLENLEEDDLEVIRRQRMEQMKKAQKDRIEMLSHGHGKYE 69
Query: 332 EIEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFL 511
E+ EKEFF A S+ +VC FY + RCKI+D H + LA KH+ TRFI ++ ++ FL
Sbjct: 70 EVADEKEFFEATKKSDKVVCLFYLPGNFRCKIVDKHFEILARKHVGTRFIHVNAEKVHFL 129
Query: 512 TGRLNVRVIPTLALVNGNKTKDFVVGFTDLGNRDDFT 622
T RLN+RVIP++A+V +T D++ GF +LG +D+FT
Sbjct: 130 TTRLNIRVIPSIAIVVKQQTVDYIRGFDELGGKDEFT 166
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 383 LVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALV-N 559
++ FY T CK + K+LAT H F K+DVD A L + +V+++PT N
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 560 GN 565
G+
Sbjct: 90 GD 91
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 383 LVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALV-N 559
++ FY T CK + K+LAT H F K+DVD A L + +V+++PT N
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 560 GN 565
G+
Sbjct: 89 GD 90
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 383 LVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALV-N 559
++ FY T CK + K+LAT H F K+DVD A L + +V+++PT N
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 560 GN 565
G+
Sbjct: 89 GD 90
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 383 LVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALV-N 559
++ FY T CK + K+LAT H F K+DVD A L + +V+++PT N
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 560 GN 565
G+
Sbjct: 90 GD 91
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 332 EIEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATK-HIETRFIKLDVDRAPF 508
EI+ +E + V HFY + +P C+ ++ + L + + R +D + P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 509 LTGRLNVRVIPTLALVNGNKTKDFVVGF 592
++ + PTL + K D + GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 332 EIEGEKEFFSACNASENLVCHFYKTDSPRCKILDMHMKQLATK-HIETRFIKLDVDRAPF 508
EI+ +E + V HFY + +P C+ ++ + L + + R +D + P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 509 LTGRLNVRVIPTLALVNGNKTKDFVVGF 592
++ + PTL + K D + GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 368 NASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTL 547
+A+ ++ F+ C+++ +Q + ++ F+K++ D A + R N+ +PT
Sbjct: 20 DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTF 79
Query: 548 ALVNGNKTKDFVVG 589
+ + D V G
Sbjct: 80 IFLKNRQQVDMVRG 93
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 368 NASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTL 547
+A+ ++ F+ C+++ +Q + ++ F+K++ D A + R N+ +PT
Sbjct: 20 DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTF 79
Query: 548 ALVNGNKTKDFVVG 589
+ + D V G
Sbjct: 80 IFLKNRQQVDMVRG 93
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.38
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +2
Query: 335 IEGEKEF---FSACNASENLVCHFYKTDSPRCKILDMHMKQLATKHIETRFIKLDVDRAP 505
+ G+ +F FSA N V P C+ + LA ++ + F+K+DVD
Sbjct: 6 VNGDSDFDRKFSAGNGKAVFVDFTASWCGP-CQYIAPIFSDLANQYKGSVFLKVDVDECR 64
Query: 506 FLTGRLNVRVIPT-LALVNGNKTKDFVVGFTDLGNR 610
V +PT +A VNG K K + G + G R
Sbjct: 65 GTAATYGVNAMPTFIAFVNGQK-KATIQGADESGLR 99
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 71 SNFTVSETSNLSFNLSV-EHTGSSGASMEQVLQHVAQTVEKQLDNEIERLDALDSGD-LE 244
+N S + N +V ++ GS + + + A ++LDNE+ER +A+ SG+ ++
Sbjct: 801 NNQCTSSGRKVKLNQNVADYCGSHLEARVEEIPEKATKSFRELDNELERCEAVHSGEKIK 860
Query: 245 AIRQQRLAEMKKRAKQR 295
+++ + + K K++
Sbjct: 861 KVKEPKPPKQPKEKKEK 877
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 71 SNFTVSETSNLSFNLSV-EHTGSSGASMEQVLQHVAQTVEKQLDNEIERLDALDSGD-LE 244
+N S + N +V ++ GS + + + A ++LDNE+ER +A+ SG+ ++
Sbjct: 814 NNQCTSSGRKVKLNQNVADYCGSHLEARVEEIPEKATKSFRELDNELERCEAVHSGEKIK 873
Query: 245 AIRQQRLAEMKKRAKQR 295
+++ + + K K++
Sbjct: 874 KVKEPKPPKQPKEKKEK 890
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 615 SSRLPRSVNPTTKSLVLFPFTSASVGITRTFSRPVRKGALSTSS 484
SS + + TTKS PF + V TR RPV +ST S
Sbjct: 518 SSSTSQRLTTTTKSSTTSPFATRFVFSTRVTFRPVSSTVVSTKS 561
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 101 LSFNLSVEHTGSSGASMEQVL--QHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLA 268
LS + + +G SG S++ L Q T+EK+LD ++ + + IRQ+ A
Sbjct: 2955 LSDRMMLASSGESGDSLQSALSLQKKHATLEKELDTRQSAMNDTEQRGKDMIRQRHFA 3012
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 101 LSFNLSVEHTGSSGASMEQVL--QHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLA 268
LS + + +G SG S++ L Q T+EK+LD ++ + + IRQ+ A
Sbjct: 2955 LSDRMMLASSGESGDSLQSALSLQKKHATLEKELDTRQSAMNDTEQRGKDMIRQRHFA 3012
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 507 KGALSTSSLMNLVSMCLVASCFMCM 433
K S S L+ LVS C+V CF C+
Sbjct: 234 KRNFSKSLLLILVSYCIVLKCFKCL 258
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 101 LSFNLSVEHTGSSGASMEQVL--QHVAQTVEKQLDNEIERLDALDSGDLEAIRQQRLA 268
LS + + +G SG S++ L Q T+EK+LD ++ + + IRQ+ A
Sbjct: 2955 LSDRMMLASSGESGDSLQSALSLQKKHATLEKELDTRQSAMNDTEQRGKDMIRQRHFA 3012
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 425 ILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALVNG 562
I D K+LA K F K+D D+ P + VR PT+ L G
Sbjct: 238 IYDQIAKELAGK---VNFAKIDCDQWPGVCQGAQVRAYPTIRLYTG 280
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 425 ILDMHMKQLATKHIETRFIKLDVDRAPFLTGRLNVRVIPTLALVNG 562
I D K+LA K F K+D D+ P + VR PT+ L G
Sbjct: 708 IYDQIAKELAGK---VNFAKIDCDQWPGVCQGAQVRAYPTIRLYTG 750
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,773,470
Number of Sequences: 27780
Number of extensions: 217697
Number of successful extensions: 872
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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