Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P18
         (342 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   5.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   7.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   7.2  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   7.2  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    21   9.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +2

Query: 137 LKLSTLMVAYSVSLTASLTVTFIRTVVGIR 226
           +++ +  +A+ ++L   +TVT +    G+R
Sbjct: 55  IQIQSFSMAFPINLAVPVTVTLLLVFCGLR 84


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  PTWGGNNLALNQQSGQYVEAIHTD 156
           PT    N+A+ +  G+Y+EAI  D
Sbjct: 534 PTHKRYNVAVTKVLGKYMEAIIVD 557


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 214 HRSDKSHRERCGQRYRVSHHQCG 146
           H SD  +RER  +      ++CG
Sbjct: 499 HPSDPEYRERADECSNAGTYKCG 521


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 181  RIAHGDFYPNGGRNPQPGCWVSTCS 255
            +I+HG+      R P P C  S CS
Sbjct: 967  KISHGELLHRMNRVPSPSC--SFCS 989


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 105 SCSESTIWTI 134
           +C+ES IWT+
Sbjct: 220 ACAESVIWTV 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,451
Number of Sequences: 2352
Number of extensions: 7759
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)