Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P18
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   9.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.5  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 229 VADSYHRSDKSHRERCGQRYR 167
           V++S   S   HRE  G+R+R
Sbjct: 37  VSNSASNSVHGHREGLGRRHR 57


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 229 VADSYHRSDKSHRERCGQRYR 167
           V++S   S   HRE  G+R+R
Sbjct: 38  VSNSASNSVHGHREGLGRRHR 58


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/43 (20%), Positives = 19/43 (44%)
 Frame = -1

Query: 240 PATGLRIPTTVRIKVTVSDAVKDTE*ATISVDSFNVLSRLLIQ 112
           PA+   +P T+    T +     T  AT +  +  ++ +  +Q
Sbjct: 97  PASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQ 139



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 253 SHSRAYEVFASTC 291
           +H R Y  F+S+C
Sbjct: 67  AHHRLYPAFSSSC 79


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 234 LLGQHLLSQSC 266
           L+GQ LL+ SC
Sbjct: 425 LMGQRLLTMSC 435


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 200 FIRTVVGIRNPVAGSALA 253
           +   VV IRN   GSA+A
Sbjct: 308 YTNIVVDIRNEDCGSAIA 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,969
Number of Sequences: 438
Number of extensions: 1940
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)