Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P17
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 31 0.31
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 31 0.31
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 29 2.2
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 29 2.2
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 29 2.2
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 29 2.2
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 29 2.2
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 28 3.8
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 28 3.8
AC024200-16|AAF36003.1| 511|Caenorhabditis elegans Hypothetical... 28 3.8
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 27 8.9
U41546-7|AAC48217.1| 185|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 27 8.9
AF098993-4|AAC67467.1| 280|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006642-2|AAF39831.1| 617|Caenorhabditis elegans Acyltransfera... 27 8.9
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG +I DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEQIV-NDESKFSVQLDVSHFKP 66
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG +I DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEQIV-NDESKFSVQLDVSHFKP 66
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG + DE+KF V +DV HF P
Sbjct: 31 NFSDN-IGEIVN--DESKFSVQLDVSHFKP 57
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG + DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEIVN--DESKFSVQLDVSHFKP 65
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG + DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEIVN--DESKFSVQLDVSHFKP 65
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG + DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEIVN--DESKFSVQLDVSHFKP 65
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 286 NYADRVIGNKITAEDENKFQVNIDVQHFAP 375
N++D IG + DE+KF V +DV HF P
Sbjct: 39 NFSDN-IGEIVN--DESKFSVQLDVSHFKP 65
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 328 DENKFQVNIDVQHFAP 375
DE+KF V +DV HF P
Sbjct: 4 DESKFSVQLDVSHFKP 19
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 328 DENKFQVNIDVQHFAP 375
DE+KF V +DV HF P
Sbjct: 5 DESKFSVQLDVSHFKP 20
>AC024200-16|AAF36003.1| 511|Caenorhabditis elegans Hypothetical
protein Y71F9AL.2 protein.
Length = 511
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 167 IWNDYSYLAISSSIRIATGFVAEVLSVNSF-HRQIPPAFFAITRIVLSEIKSQR 325
+W+D ++ S + I F +V+ F HR I P+ FAI SEI+S+R
Sbjct: 135 VWSDGTW----SRVGIQCLFAIKVMHDAGFVHRDIKPSNFAIGFSATSEIRSRR 184
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 368 LPRRKLVSKSLMVSWLSKVSTKN 436
+PR+ +VS SL +SWL +V T+N
Sbjct: 1170 VPRKGMVSSSLYMSWL-EVMTRN 1191
>U41546-7|AAC48217.1| 185|Caenorhabditis elegans Hypothetical
protein T25B6.1 protein.
Length = 185
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 132 DSSEPRRRCNEEYGTTTHIWQFLRASELQQDSSP 233
D EPR+R + E G+ I + +L Q S+P
Sbjct: 23 DEREPRKRISAEAGSIDSIGWLAKIRKLNQQSNP 56
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 368 LPRRKLVSKSLMVSWLSKVSTKN 436
+PR+ +VS SL +SWL +V T+N
Sbjct: 1170 VPRKGMVSSSLYMSWL-EVMTRN 1191
>AF098993-4|AAC67467.1| 280|Caenorhabditis elegans Hypothetical
protein T10B11.5 protein.
Length = 280
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 100 YSIEDLYKMSLIPLNHV-DDVMKNMERLLISGNFFE 204
+SIE++ K +L+ +NHV D ++KN +L GNF++
Sbjct: 125 FSIENMQKHALV-MNHVYDQLIKNSNFVL--GNFYK 157
>AC006642-2|AAF39831.1| 617|Caenorhabditis elegans
Acyltransferase-like protein 4,isoform a protein.
Length = 617
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 238 DFGDESCCNSDARRNCQI*VVVPYSSLHRRRGSEEST 128
DFGDESC + V SL R+ SE ST
Sbjct: 130 DFGDESCLKRKFGSTTSLASVGSCCSLRNRKMSESST 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,633,494
Number of Sequences: 27780
Number of extensions: 218593
Number of successful extensions: 593
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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