Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P17
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   5.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   5.0  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   5.0  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   6.6  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   8.7  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   8.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 18  YKRRNRAGLQVNSHNIETRKYKEFVHALFD 107
           ++R  R    VN  N+   K K+F+  L+D
Sbjct: 205 FRRMGREVFAVNFMNVMRMKLKQFMPRLYD 234


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 132 DSSEPRRRCNEEYGTTTHIWQFL 200
           D +  +R+  E  G+TT++W+FL
Sbjct: 444 DGAAVKRKSRE--GSTTYLWEFL 464


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 217 NRIRRRSPFGQFFPP 261
           N I  R PF + FPP
Sbjct: 238 NEIFNRVPFDKIFPP 252


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 165 LHYIVDVVQRNQ 130
           LH+I+DV ++NQ
Sbjct: 39  LHHIIDVDEKNQ 50


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 223 SCCNSDARRNCQI 185
           SCCNS     C I
Sbjct: 162 SCCNSPENNTCSI 174


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 208 PNCNRIRRRSPFGQFFPPS 264
           P    I   +PF QF PP+
Sbjct: 148 PRFRHIGPSTPFPQFIPPN 166


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 138 SEPRRRCNEEYGTT 179
           +E + RC  E+GTT
Sbjct: 39  AEDKARCMSEHGTT 52


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 138 SEPRRRCNEEYGTT 179
           +E + RC  E+GTT
Sbjct: 39  AEDKARCMSEHGTT 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,980
Number of Sequences: 438
Number of extensions: 2855
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)