Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P16
         (418 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...   168   8e-44
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   0.48 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   0.48 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.5  

>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score =  168 bits (408), Expect = 8e-44
 Identities = 73/112 (65%), Positives = 89/112 (79%)
 Frame = +1

Query: 28  MSSITAVVPKLYQEYXXXXXXXXXIIDAYLLYVFLTAVIQFAYCCLVGTFPFNSFLSGFI 207
           M ++T V+ K Y EY         I+DAYLLY+ LT ++QF YCCLVGTFPFNSFL+GFI
Sbjct: 1   MKNLTEVLHKFYDEYTHKTPKKLKIVDAYLLYILLTGIMQFVYCCLVGTFPFNSFLAGFI 60

Query: 208 STVSSFVLGVCLRLQVNPENKTEFQGLSAERGFADFIFAHLVLHIVVINFIG 363
           STVS FVLGVCLRLQ NP+NK +F G+S ERGFADF+FAH++LH+VV+NF G
Sbjct: 61  STVSCFVLGVCLRLQSNPQNKEQFFGISPERGFADFVFAHIILHLVVVNFSG 112


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 175 FPFNSFLSGFISTVSSFVLGVCLRL-QVNPENKTEFQ 282
           FP N+ L+G   T+   V G C  L  VNP  +  FQ
Sbjct: 176 FPENNTLTGVYKTMEPSVTGECETLYDVNPVPEFHFQ 212


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 175 FPFNSFLSGFISTVSSFVLGVCLRL-QVNPENKTEFQ 282
           FP N+ L+G   T+   V G C  L  VNP  +  FQ
Sbjct: 176 FPENNTLTGVYKTMEPSVTGECETLYDVNPVPEFHFQ 212


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
 Frame = +1

Query: 115 LLYVFLTAVIQFAYCCLVGTFPFNSFLSGFISTVSSFVLGVCLRLQV---NPENKTEFQG 285
           LL++F+            G F FNS +    S   SFV  +    Q+      N   + G
Sbjct: 618 LLFLFIVIFALLGMQVFGGKFNFNSSVDKPRSNFDSFVQSLLTVFQILTGEDWNMVMYDG 677

Query: 286 LSAERGFADF-IFAHLVLHIVVI 351
           + A  G A   I A +   I+ I
Sbjct: 678 IQAYGGVASLGIIASIYFIILFI 700


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,625
Number of Sequences: 2352
Number of extensions: 5604
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)