SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P15
         (408 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    30   1.0  
AY071067-1|AAL48689.1|  844|Drosophila melanogaster RE14386p pro...    28   5.4  
AE014297-2516|AAF55550.1|  844|Drosophila melanogaster CG7678-PA...    28   5.4  
AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-P...    27   7.2  

>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
           protein.
          Length = 1459

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 138 FYCIFVILFYRYVFESNKTIERSKTPNEQQDLRNLNY 28
           F C+ + L Y Y++   K I RSK+ N     +NL+Y
Sbjct: 805 FICLSLGLLYLYIYRILKRILRSKSQNYIHGYQNLSY 841


>AY071067-1|AAL48689.1|  844|Drosophila melanogaster RE14386p
           protein.
          Length = 844

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/63 (23%), Positives = 35/63 (55%)
 Frame = -1

Query: 249 HIRFHLIINNKNYLSYP*ILYYVFIQYIYNKIFSVL*FYCIFVILFYRYVFESNKTIERS 70
           H+ F + ++ +N++ +    Y + +Q++   +F +L F  +  ++FY++V  S  T   +
Sbjct: 548 HMVFGVCMSVENFVFFKKYAY-IILQFVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEA 606

Query: 69  KTP 61
            TP
Sbjct: 607 DTP 609


>AE014297-2516|AAF55550.1|  844|Drosophila melanogaster CG7678-PA
           protein.
          Length = 844

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/63 (23%), Positives = 35/63 (55%)
 Frame = -1

Query: 249 HIRFHLIINNKNYLSYP*ILYYVFIQYIYNKIFSVL*FYCIFVILFYRYVFESNKTIERS 70
           H+ F + ++ +N++ +    Y + +Q++   +F +L F  +  ++FY++V  S  T   +
Sbjct: 548 HMVFGVCMSVENFVFFKKYAY-IILQFVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEA 606

Query: 69  KTP 61
            TP
Sbjct: 607 DTP 609


>AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-PA
           protein.
          Length = 595

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 FYCIFVILFYRYVFESNKTIERSKTPNEQQDLRNLNYIRS 19
           FY IFV++   +VF SN+   R+ T      L NL  +R+
Sbjct: 309 FYIIFVLVEMLFVFISNRFNGRNFTMRYTNPLINLRAVRA 348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,153,404
Number of Sequences: 53049
Number of extensions: 255194
Number of successful extensions: 345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -