Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P14
(468 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 169 2e-43
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 31 0.088
SPAC57A10.12c |ura3||dihydroorotate dehydrogenase Ura3|Schizosac... 27 1.4
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 27 1.9
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 25 4.4
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 25 4.4
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 5.8
SPAC4A8.04 |isp6|prb1|vacuolar serine protease Isp6|Schizosaccha... 25 5.8
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 25 5.8
SPAC227.11c |||sensor for misfolded ER glycoproteins Yos9 |Schiz... 25 7.6
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 169 bits (411), Expect = 2e-43
Identities = 81/153 (52%), Positives = 107/153 (69%)
Frame = +1
Query: 10 GYTGVNVTTAIMDDGVDYMHPDLKYNYNAEASYDFSSNDPFPYPRYTDDWFNSHGTRCAG 189
GY G NVT A +DDG+D+ HPDL+ Y + S+DF+ N P P+ +DD HGTRCAG
Sbjct: 150 GYFGENVTVAFVDDGIDFKHPDLQAAYTSLGSWDFNDNIADPLPKLSDD---QHGTRCAG 206
Query: 190 EVAAARDNGVCGVGVAYHSKVAGIRMLDQPYMTDLIEANSMGHEPHKIHIYSASWGPTDN 369
EVAAA N VCGVG+A +KVAG+R+L P +TD +E+ ++ + HIYS SWGP D+
Sbjct: 207 EVAAAW-NDVCGVGIAPRAKVAGLRILSAP-ITDAVESEALNYGFQTNHIYSCSWGPADD 264
Query: 370 GRTVDGPRNATMRAIVRGVNEGRNGLGNIYVWA 468
GR +D P AT RA++ GV GRNGLG+I+V+A
Sbjct: 265 GRAMDAPNTATRRALMNGVLNGRNGLGSIFVFA 297
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 31.1 bits (67), Expect = 0.088
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -1
Query: 336 VNLMRLMAHRVGLDEIRHV--RLVQHSYTSNFGMVSDPNTTNTIISCSGYLTSASRTMAI 163
VN++R +R D+ RH R + YTS+FG + P+ + + C +T+ + T A
Sbjct: 218 VNIIR--DYREDFDDNRHFWPREIWSKYTSSFGDLCLPDNSEKALECLSDMTANALTHAT 275
Query: 162 KPIISVSRV 136
++ +S++
Sbjct: 276 DALVYLSQL 284
>SPAC57A10.12c |ura3||dihydroorotate dehydrogenase
Ura3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 27.1 bits (57), Expect = 1.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 325 HKIHIYSASWGPTDNGRTVDGP 390
H++ I +ASWG T R D P
Sbjct: 82 HRVAILAASWGITPKDRVADDP 103
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 1.9
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = -1
Query: 336 VNLMRLMAHRVGLDEIRHVRLVQHSYTSNFGMVSDPNTTNTIISCSGYLTSASRTMAIKP 157
+ L+ + VG+ I+ ++ S SNF + T + S Y+ S S ++
Sbjct: 282 LELLHTVQEVVGMQAIKFFIVLILSSLSNFYLNIATFTQIKVTSPVTYMISVSARSILQT 341
Query: 156 IISVSRVGEWIVTTKIVRRFSVVIIL 79
+++V+ +GE + +I + V++IL
Sbjct: 342 LLAVAFLGETLYGNRI---YGVILIL 364
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 4.4
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = +1
Query: 52 GVDYMHPDLKYNYNAEASYDFSSNDPFPYPRYTDDWFNS 168
G Y + + Y +S PF YP++ + F++
Sbjct: 242 GASYQNESANPPVQSPMQYSYSQGQPFSYPQHKNQSFSA 280
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 221 QTPLSRAAATSPAHLVPWLLNQ 156
QTPL RAAA +V +L++Q
Sbjct: 142 QTPLHRAAAVGKIQVVKYLISQ 163
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.0 bits (52), Expect = 5.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 264 SYTSNFGMVSDPNTTNTIISCSGYLTSASRTMAIKPIISVSRV 136
+Y+ + MVS PN T+ ++ + LT+ S + + I + +V
Sbjct: 244 NYSFDTSMVSSPNKTHVVVCSTDDLTAIS-SFILSSIYKIRKV 285
>SPAC4A8.04 |isp6|prb1|vacuolar serine protease
Isp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 5.8
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +2
Query: 173 VRDALVR*PLHEIMVFVVLGSLTI 244
V+DA+++ +H++++ + +GS TI
Sbjct: 434 VKDAIIKMGIHDVLLSIPVGSSTI 457
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 25.0 bits (52), Expect = 5.8
Identities = 8/34 (23%), Positives = 18/34 (52%)
Frame = -1
Query: 384 IHCPPVVSWSPGRAVYVNLMRLMAHRVGLDEIRH 283
+H PP +S PG+ + + +++ DE+ +
Sbjct: 170 VHGPPALSEKPGKCILKDKTNAHVNKIPQDEVNY 203
>SPAC227.11c |||sensor for misfolded ER glycoproteins Yos9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 322
Score = 24.6 bits (51), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 121 NDPFPYPRYTDDWFN 165
ND + YP+Y+ +W N
Sbjct: 41 NDAYEYPKYSFEWSN 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,189,902
Number of Sequences: 5004
Number of extensions: 48358
Number of successful extensions: 163
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 178394480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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