Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P10
         (265 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   4.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   4.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   5.9  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   5.9  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 58  YNNHFYG 78
           YNNH YG
Sbjct: 86  YNNHLYG 92


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 70  FYGLVSFTAVG 102
           F+GLVS TA+G
Sbjct: 315 FFGLVSDTALG 325


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 201 QYLRGARSICQTCGHPSQATEG 136
           +Y+    S+ +TC     +TEG
Sbjct: 103 EYIPRVESVVETCKKEVTSTEG 124


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 201 QYLRGARSICQTCGHPSQATEG 136
           +Y+    S+ +TC     +TEG
Sbjct: 77  EYIPRVESVVETCKKEVTSTEG 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,914
Number of Sequences: 438
Number of extensions: 1036
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)