Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P06
         (266 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   2.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    21   5.9  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       21   7.8  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    21   7.8  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 158 PAGSPTICSADVSVITANAVHRQRG 84
           P  +PT   A +S++ +   HRQ G
Sbjct: 5   PTAAPTSADACLSIVHSLMCHRQGG 29


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 75  HLCAALPVHRISGDY*HVCG 134
           HL   L  H    +Y HVCG
Sbjct: 924 HLSQVLTGHGYFREYLHVCG 943


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 96  PAARRTNATTSFLTRNNFSYTLLELDYRG 10
           P  RRT A       ++FS TLL  + RG
Sbjct: 60  PKYRRTTARAVDQEGSSFSRTLLSDESRG 88


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 124 TSAEHIVGEPAG*TPV 171
           T A+ ++G P G TP+
Sbjct: 201 TGAQKVLGAPPGITPI 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,712
Number of Sequences: 2352
Number of extensions: 4262
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14857014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)