Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_P05
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 143 4e-35
07_01_0578 + 4295386-4296489,4297394-4297507 142 9e-35
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.020
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 34 0.035
03_05_0366 - 23505755-23506441 31 0.33
11_01_0338 + 2522698-2523213 31 0.44
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 29 1.8
02_04_0457 + 23093020-23093343,23093798-23093806 29 1.8
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 28 2.3
07_03_0874 - 22202699-22203070,22204239-22204874 28 2.3
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 28 3.1
03_01_0092 - 731069-731434,731569-733080 28 3.1
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 27 4.1
03_02_0769 + 11029923-11030172,11030442-11030569,11030892-110311... 27 5.4
10_06_0151 + 11276554-11276916,11277020-11277403 27 7.1
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 27 7.1
09_02_0384 - 8294914-8297817 27 7.1
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 27 7.1
06_01_1138 - 9429447-9433868 27 7.1
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 27 7.1
02_02_0434 + 10196427-10196606,10197132-10197152,10197816-101978... 27 7.1
12_02_0283 + 16784063-16784152,16785084-16785281 26 9.4
11_06_0120 - 20324794-20325204,20325416-20325545,20326172-203262... 26 9.4
11_06_0095 - 20030237-20031711,20031731-20033057 26 9.4
08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456... 26 9.4
04_04_0670 - 27128153-27129075,27129152-27129266,27129348-271295... 26 9.4
04_03_1022 - 21778315-21779007 26 9.4
03_06_0212 + 32400982-32402055 26 9.4
02_05_0342 - 28128670-28129101,28129484-28129523,28129846-281299... 26 9.4
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 143 bits (347), Expect = 4e-35
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Frame = +1
Query: 91 SVARPLVSVYSEKSEVVA-GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 267
+ ARPLVSV + + ++ A + +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 268 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 393
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRM
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRM 104
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 142 bits (344), Expect = 9e-35
Identities = 68/100 (68%), Positives = 80/100 (80%), Gaps = 2/100 (2%)
Frame = +1
Query: 100 RPLVSVYSEKSEVVA--GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 273
RPLVSV + + ++ +SL L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 274 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 393
TSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRM
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRM 105
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.020
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 220 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 390
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 34.3 bits (75), Expect = 0.035
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 386 PPRHMLPNAPCPDLWVPPP 330
PPRH++P P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 0.33
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 166 FVFKAPIRPDLVNDVHVSMSKNAR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 342
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 343 HRSGQGA 363
+ + + A
Sbjct: 168 NDNDEEA 174
>11_01_0338 + 2522698-2523213
Length = 171
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 317 IRATARPVPQDSALV**PASLLTQ*GWRAFFDIDTWTSLTRSGLMGALNTNGRGSEA 147
+R+ ARP+P+ +AL P+S A I + + R G+M A G EA
Sbjct: 68 VRSAARPIPETAALTLVPSSSAAAMAKSAPVRIPSEAAAARRGVMWAAQAGGEDGEA 124
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 148 ASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK--EAGHQT 276
ASL +P F+ PI DL+ D + + + C+ + EAGH T
Sbjct: 295 ASLIVPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDT 339
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 265 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 369
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 175 KAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 288
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>07_03_0874 - 22202699-22203070,22204239-22204874
Length = 335
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 73 ISEVIPPKNTIDGGKDHPPCH 11
+S+ P NT GG PPCH
Sbjct: 28 LSQAQSPANTSSGGSTSPPCH 48
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 169 VFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 339
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 340 T 342
T
Sbjct: 215 T 215
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 383 PRHMLPNAPCPDLWVPPPRTRGIRATARPVP 291
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 338 PPPRTRGIRATARPVPQDSA 279
PPPRTR + PVP SA
Sbjct: 166 PPPRTRQVNPAPPPVPSPSA 185
>03_02_0769 +
11029923-11030172,11030442-11030569,11030892-11031137,
11031302-11031557,11031665-11031888
Length = 367
Score = 27.1 bits (57), Expect = 5.4
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 136 VVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVAR 315
VVAG +P FVF + N+ VS+SK P + + GHQ + + GR +
Sbjct: 24 VVAGGGMPATFVFGDSLVDAGNNNYLVSLSKANYPPNGIDFD-GHQPTGR-YTNGRTIVD 81
Query: 316 I 318
I
Sbjct: 82 I 82
>10_06_0151 + 11276554-11276916,11277020-11277403
Length = 248
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 215 TWTSLTRSGLMGALNTNGRGSEAPATT---SLFSEYTDTKGRATDRLI 81
TWTS+ G G +NG G+ A + + S +E+TDT A DR +
Sbjct: 11 TWTSVPGEGGGGGGRSNGGGTAAESDSRELSFDAEHTDT---ALDRYV 55
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 385 RRGTCYRMHPAQICGYHHHVHGEYGLQHDRYP-KTRRWFD 269
+RG CY + C H + + + +D YP + R FD
Sbjct: 1680 KRGVCYSILDKGYCKNGEHCNFSHSIPNDGYPSRNSRHFD 1719
>09_02_0384 - 8294914-8297817
Length = 967
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 106 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSK 228
LV +Y S V PLP + + PIR LV +H+++ K
Sbjct: 116 LVDLYDRGSFEVVSVDGPLPSIEEKPIREKLVG-MHLNVMK 155
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 190 PDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIP 321
PD++ + H+ + KN R +A +G G VA++P
Sbjct: 63 PDVIQNYHLCVVKNRRLDSDTIAKASQMKIIMQYGVGLEVAQLP 106
>06_01_1138 - 9429447-9433868
Length = 1473
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 373 CYRMHPAQICGYHHHVHGEYG 311
CY +H Q G HV GEYG
Sbjct: 280 CYILHRCQHQGTSDHVGGEYG 300
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 340 YHHHVHGEYGLQHDRYPKTRRWFDDRPP 257
+HHH HG +G H++ + + PP
Sbjct: 37 HHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>02_02_0434 +
10196427-10196606,10197132-10197152,10197816-10197877,
10198784-10199036
Length = 171
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +3
Query: 291 GYRSCCSPYSPCTWWWYPQI-WAGCI 365
G+ +CC TWWW + W I
Sbjct: 3 GHVACCLTRQRATWWWQAALRWTDLI 28
>12_02_0283 + 16784063-16784152,16785084-16785281
Length = 95
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 70 SEVIPPKNTIDGGKDHPPCHPR 5
S++ PPKN+ G +D P PR
Sbjct: 49 SDLSPPKNSSSGDRDTPTFDPR 70
>11_06_0120 -
20324794-20325204,20325416-20325545,20326172-20326255,
20326584-20326823,20327418-20327498,20327761-20328113
Length = 432
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 292 PKTRRWFDDRPPC*RSRAGARSS 224
PK R+W + P C SR +RS+
Sbjct: 408 PKKRKWIERSPDCVASRLRSRSN 430
>11_06_0095 - 20030237-20031711,20031731-20033057
Length = 933
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 218 DTWTSLTRSGLMGALNTNGRGSEAPATTSL 129
D W S L GAL +N RGS TT +
Sbjct: 298 DVWAPEAISNLFGALVSNLRGSRVLVTTRI 327
>08_01_0525 +
4564885-4565221,4565337-4565476,4565582-4565677,
4566079-4566146,4566542-4566643,4567492-4567630,
4567758-4567898,4568241-4568297,4568400-4568459,
4568866-4568973,4569834-4569994,4570453-4570531,
4571357-4571490,4571846-4571951,4572244-4572432,
4572595-4572822,4573028-4573183,4573491-4573532,
4573752-4573868,4573945-4574121
Length = 878
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 383 PRHMLPNAPCPDLWVPPPRTRGIRATA 303
P H+LP++P PPPR R++A
Sbjct: 13 PWHVLPSSPSQPPSSPPPRASADRSSA 39
>04_04_0670 -
27128153-27129075,27129152-27129266,27129348-27129537,
27129652-27129786,27129874-27129971,27131075-27131764
Length = 716
Score = 26.2 bits (55), Expect = 9.4
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 37 GGKDHPPCHP 8
GG+DHPP HP
Sbjct: 140 GGQDHPPLHP 149
>04_03_1022 - 21778315-21779007
Length = 230
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -2
Query: 383 PRHMLPNAPCPDLWVPPPRTRGIRATARPVP 291
P H+LP +P P W P T P P
Sbjct: 49 PPHLLPPSPAPQQWYDHPPNYHPPHTPAPAP 79
>03_06_0212 + 32400982-32402055
Length = 357
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 382 RGTCYRMHPAQICGYHHHVH 323
RGT P+ + G+HHH H
Sbjct: 283 RGTLQSNSPSNMSGHHHHHH 302
>02_05_0342 -
28128670-28129101,28129484-28129523,28129846-28129958,
28129998-28130093,28130196-28130327,28130485-28130805
Length = 377
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 12 WHGGWSLPPSIVFFGGITSLIKRNESVSSPTFS 110
W S+PPS+ FG ++ + +N S+ P +S
Sbjct: 196 WRNYMSMPPSLKRFGALSWGVPQNCSLPLPNWS 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,881,923
Number of Sequences: 37544
Number of extensions: 285681
Number of successful extensions: 1308
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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