Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_P04
         (467 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.0  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    22   9.3  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -2

Query: 259  FSRNTHNVTQNKHLKIFPQDPQSQLHQQ-HIFYGENPNDNK 140
            F  N  N TQ    K+   +P  + +   H  YG +P +NK
Sbjct: 1749 FILNFDNATQLLTGKVAELNPSCEGYPYTHTIYGNDPTENK 1789


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 141 SPKCYKQIIDFMYHCFSCN 85
           SP+CY    + MY+ F+ N
Sbjct: 202 SPRCYPMPPEHMYNMFNFN 220


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 211 FPQDPQSQLHQQH 173
           FPQ+P    H+QH
Sbjct: 37  FPQEPYRVCHEQH 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,461
Number of Sequences: 2352
Number of extensions: 7431
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)