Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O22
(400 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 0.97
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 2.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 3.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 3.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 3.9
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 5.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 6.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 6.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 6.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 6.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 9.1
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 9.1
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 0.97
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 289 NNFCNKNKTLYWKCVHG*VIHMILSVYSG 375
NN+ N NK LY+ ++ I + + VY G
Sbjct: 327 NNYKNYNKKLYYNIINIEQIPVPVPVYCG 355
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 238 SLTIDYKKKSTNFTRSCNN--FCNKNKTLYWK 327
SL+ +YK + N + NN + N NK LY+K
Sbjct: 317 SLSNNYKYSNYNNYNNYNNNNYNNYNKKLYYK 348
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 265 STNFTRS-CNNFCNKNKTLYWK 327
S N+ S NN+ N NK LY+K
Sbjct: 86 SNNYKYSNYNNYNNYNKKLYYK 107
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 268 TNFTRSCNNFCNKNKTLYW 324
+N+ NN+ N NK LY+
Sbjct: 92 SNYNNYNNNYNNYNKKLYY 110
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 3.0
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 220 TISLSKSLTIDYKKKSTNFTRSCNNFCNKNKTLYWKCVH 336
TI + + +Y + N NN+ N K LY+ ++
Sbjct: 322 TIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 250 DYKKKSTNFTRSCNNFCNKNKTLYW 324
+Y N+ NN+ N K LY+
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYKKLYY 353
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 221 LFHCLKV*QLITKKNPQTSHDLVITFAIKTKRSI 322
L +CL+ +++ P+TS + K KR I
Sbjct: 64 LRNCLEKLKVLVPLGPETSRHTTLGLLTKAKRFI 97
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1
Query: 226 SLSKSLTIDYKKKSTNFTRSCN 291
S S+ +Y+KK + + CN
Sbjct: 3 SCSRDRNREYRKKDRQYEKLCN 24
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1
Query: 226 SLSKSLTIDYKKKSTNFTRSCN 291
S S+ +Y+KK + + CN
Sbjct: 3 SCSRDRNREYRKKDRQYEKLCN 24
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1
Query: 226 SLSKSLTIDYKKKSTNFTRSCN 291
S S+ +Y+KK + + CN
Sbjct: 3 SCSRDRNREYRKKDRQYEKLCN 24
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1
Query: 226 SLSKSLTIDYKKKSTNFTRSCN 291
S S+ +Y+KK + + CN
Sbjct: 3 SCSRDRNREYRKKDRQYEKLCN 24
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 289 NNFCNKNKTLYWKCVHG*VIHMILSVYSG 375
NN+ N K LY+ ++ I + + +Y G
Sbjct: 325 NNYNNNYKPLYYNIINIEQIPVPVPIYCG 353
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 221 LFHCLKV*QLITKKNPQTSHDLVITFAIK 307
LF ++ ++TK N HD V+ IK
Sbjct: 173 LFEREEIKNVLTKINKIEEHDTVLVVNIK 201
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.2 bits (40), Expect = 9.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 271 LWIFFCNQLSN 239
LW+ +CN L N
Sbjct: 413 LWLGYCNSLLN 423
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,665
Number of Sequences: 438
Number of extensions: 1540
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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