Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O21
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   0.94 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.8  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = -2

Query: 87  ETGVAWQRGHGK--MRGRNGGCG 25
           ETG    RGHGK   RGR G  G
Sbjct: 77  ETGRGKGRGHGKGGSRGRGGNRG 99


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 187 LSYFYF*LNKNY 152
           L++FYF LN NY
Sbjct: 228 LNHFYFMLNHNY 239


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 391 ATTSQSRMTSLATYTGERFSS*DTVVF 311
           ATT + R++SLA  + +  ++ DT+V+
Sbjct: 178 ATTGKGRLSSLAVQSLDCNTNSDTMVY 204


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 187 LSYFYF*LNKNY 152
           L++FYF LN NY
Sbjct: 228 LNHFYFMLNHNY 239


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 391 ATTSQSRMTSLATYTGERFSS*DTVVF 311
           ATT + R++SLA  + +  ++ DT+V+
Sbjct: 178 ATTGKGRLSSLAVQSLDCNTNSDTMVY 204


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 391 ATTSQSRMTSLATYTGERFSS*DTVVF 311
           ATT + R++SLA  + +  ++ DT+V+
Sbjct: 178 ATTGKGRLSSLAVQSLDCNTNSDTMVY 204


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 316 PQYLKTKIFHQCMLPVMSYETETWS 390
           P ++   I    +LP ++ E E W+
Sbjct: 507 PNWILENILDMLVLPKLTLEVEEWN 531


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 225 LNYRFLKG*SSNPIRLSHVREATQNLLVQKTTVSQDEN 338
           +N+R L       IR +H     QN  +Q T    D N
Sbjct: 396 VNFRILGANVKELIRNTHCVNNNQNDNIQNTNNQNDNN 433


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 2   HEAAQVGAPQPPFLPR 49
           H A+    PQPP  PR
Sbjct: 555 HRASLSKTPQPPQCPR 570


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,644
Number of Sequences: 438
Number of extensions: 2773
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)