Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O20
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 38 0.005
03_06_0755 - 36029836-36030123,36030352-36030444,36030601-360306... 31 0.60
02_01_0108 - 789597-790224,790441-790570,790946-791081 31 0.79
08_02_1252 + 25595776-25596564 30 1.4
01_01_0053 + 409447-409818 30 1.4
11_06_0309 + 22265906-22266929,22267451-22267629,22267966-222681... 29 2.4
10_08_0631 - 19435796-19436452,19437237-19438130 29 2.4
06_03_0143 + 17215975-17216745 29 2.4
05_03_0056 - 7867502-7868068 29 2.4
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 29 2.4
11_04_0142 + 14027726-14029081 29 3.2
10_01_0178 + 2032463-2032888 29 3.2
08_02_1470 - 27350173-27350643,27350721-27351167 29 3.2
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 29 3.2
08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162,656... 29 3.2
04_01_0205 - 2489201-2489630,2489704-2489945 29 3.2
02_02_0051 - 6386618-6386713,6386834-6386959 29 3.2
10_06_0175 - 11490280-11491000,11491869-11491947,11493613-114938... 28 4.2
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 4.2
05_05_0266 - 23694466-23696787,23696885-23697187 28 4.2
08_02_1595 - 28114751-28114858,28115018-28115283,28116609-281167... 28 5.6
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565... 28 5.6
05_05_0321 + 24091997-24092530 28 5.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 5.6
03_05_0738 + 27267514-27268279,27268373-27268395 28 5.6
03_05_0051 - 20288456-20291728 28 5.6
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 25 6.1
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 7.4
10_02_0009 + 4128909-4130123 27 7.4
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 27 7.4
07_03_0098 - 13383385-13384392 27 7.4
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 27 7.4
03_05_0509 - 25032494-25033156 27 7.4
02_05_0266 + 27280592-27281668 27 7.4
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 27 7.4
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 27 9.8
08_02_0942 - 22845270-22845570,22845650-22845820,22845903-228467... 27 9.8
06_03_0526 + 21771519-21771607,21771685-21771810,21771890-217720... 27 9.8
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 27 9.8
03_06_0007 - 30975910-30975921,30976660-30976747,30976850-309769... 27 9.8
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 9.8
03_01_0037 - 335646-335855,336480-336686,336962-337129,337377-33... 27 9.8
02_05_1277 - 35408097-35409080 27 9.8
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 27 9.8
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 37.9 bits (84), Expect = 0.005
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 VPTSQCPRSASGFTLSQSLVERLGRDHEQPMLPPLHHPIRDNSGCARSTYSPLQA-LSES 350
V S P A G+ + G P + P P+R +ST P+++ +E+
Sbjct: 82 VERSPSPPIARGWPADDDERQERGEPSGSPAMAP---PVRHAPHVEQSTPVPIKSPAAEA 138
Query: 351 TCRDHGAQS-APPPQPIPRVQQSSSQNVTLHPAVARCTA 464
C G+ + APP QP P V+QS+ AVA+ A
Sbjct: 139 VCMPSGSPAMAPPVQPAPHVEQSTPLPAKEPAAVAKVEA 177
>03_06_0755 -
36029836-36030123,36030352-36030444,36030601-36030676,
36030755-36030880,36030957-36031013,36031132-36031253
Length = 253
Score = 31.1 bits (67), Expect = 0.60
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 366 GAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASLELAALWRSFHELGTE 515
G+ +PPP P PR S++ + V R S ELA L FH GT+
Sbjct: 17 GSLPSPPPPPPPRPSPSNNLRIARREFVLR---SSELATLAAIFHLSGTK 63
>02_01_0108 - 789597-790224,790441-790570,790946-791081
Length = 297
Score = 30.7 bits (66), Expect = 0.79
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 273 PLHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSS 422
P HH I+++SG +++ Q + S+ HG SAP P P QQ S
Sbjct: 153 PHHHQIKNSSGSTTTSHD--QDANLSSGGSHGGISAPAPVAEPFDQQPKS 200
>08_02_1252 + 25595776-25596564
Length = 262
Score = 29.9 bits (64), Expect = 1.4
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Frame = +3
Query: 66 TDLSCRVEKIIGRR*GNVMEGQEWRGDWHQPRQMDGVPT--SQCPRSASGFTLSQSLVER 239
T LS G+ G ++ Q+WR W P + + S+ +S S + S S
Sbjct: 77 TLLSSSTSSRYGQWGGGRLQRQQWRRQW-VPTTLPSLSQIWSEVRQSVSSSS-SSSTAAS 134
Query: 240 LGRDHEQPMLPPLH---HPIRDNSGCARSTYSPLQALSESTCRDHGAQSA--PPPQPIPR 404
+P LP HP+ + +S + +A + ST R H A SA P PQ R
Sbjct: 135 AAPPLVRPRLPSRRRCLHPLPPSRRLRQSILNLHRARAVSTLRLHHAASASLPLPQRRHR 194
Query: 405 VQQSSSQNVTLHPAVARCTASLELAAL 485
SSQ+ +V R L L+ L
Sbjct: 195 AASISSQSPVCQNSV-RPRPRLNLSVL 220
>01_01_0053 + 409447-409818
Length = 123
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 279 HHPIRDNSGCARSTYSPLQALSESTCRDHG-AQSAPPPQP 395
HHP D+ A Y ++ TCRD G APPP P
Sbjct: 48 HHPY-DDCVAALRLYRRMRGARPHTCRDAGVGPHAPPPTP 86
>11_06_0309 +
22265906-22266929,22267451-22267629,22267966-22268179,
22268273-22268510,22268617-22268767,22268934-22269158
Length = 676
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Frame = +3
Query: 258 QPMLPPLHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNV-- 431
QPMLP D+ + ++ L + T R S+PPP + +V
Sbjct: 157 QPMLPGWDPGNADSVAIITNI---IKVLVQETARTAAYNSSPPPPATTTYYATGRMDVSA 213
Query: 432 ---TLHPAVARCTASLELAALWRSFHELGTEMIVTKAGRR 542
TL+ ++A+CT L WR + AGRR
Sbjct: 214 TFPTLY-SMAQCTPDLRPGGCWRCLQSINDMTTRYFAGRR 252
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 357 RDHGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASLELAALW 488
+ H A PPP P+P +N L AV + L ALW
Sbjct: 3 KPHHAAQPPPPPPLPLPLPLPPRNCPLATAVLALLSVLLATALW 46
>06_03_0143 + 17215975-17216745
Length = 256
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/84 (27%), Positives = 30/84 (35%)
Frame = +3
Query: 285 PIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTA 464
P + G A ST SE+ Q AP P +P V S + P RC
Sbjct: 52 PAQPGPGAASSTIPAFPEQSEAAAATSVCQLAPSPPLLPAVLASCNAGGGALPPRLRCCP 111
Query: 465 SLELAALWRSFHELGTEMIVTKAG 536
+L A W T ++ AG
Sbjct: 112 AL---AAWMYAAYAPTALLAAAAG 132
>05_03_0056 - 7867502-7868068
Length = 188
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Frame = +3
Query: 111 GNVMEGQEWRGDWHQPRQ----MDGVPTS-------QCPRSASGFTLSQSLVERLGRDHE 257
G ME +EWR W + R+ +GV TS Q PRS S +LS +E + R+
Sbjct: 114 GTGMESEEWRCVWERSREGARHFEGVDTSLPCVEHCQRPRSLS-LSLSAGRLEEMDREWA 172
Query: 258 QP 263
P
Sbjct: 173 SP 174
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 381 PPPQPIPRVQQSSSQNVTLHPAVARCTASLELAALWRSF 497
PPPQP+PR + PA AR A+ L +L +SF
Sbjct: 10 PPPQPLPRRPPPPKPSAESKPAKARAPATSLLESL-KSF 47
>11_04_0142 + 14027726-14029081
Length = 451
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 363 HGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASL 470
HG+ SAPP P P + +Q V PA A A +
Sbjct: 173 HGSSSAPPSPPAPANPPNHNQAVGHQPAAAAPNAGV 208
>10_01_0178 + 2032463-2032888
Length = 141
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +3
Query: 327 PLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASLELAAL 485
PLQ + ++ C + +PPP +P Q+ S + C+ + A+
Sbjct: 30 PLQTVLDAICGGMSLELSPPPSSMPSAQEGSRAAAAVLDLRRECSGAAAFVAV 82
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 384 PPQPIPRVQQSSSQNVTLHPAVARCTASLELAALWRSFHELGT 512
PP+P P QQ Q PA A A A W SF L +
Sbjct: 232 PPRPPPAQQQQRRQFQPPAPATATAPAPQTATASWESFDLLSS 274
>08_02_0204 - 14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 246 RDHEQPMLPPLHHPIRD--NSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIP 401
R H QPM P+ P + NS A S P+Q+ + T A P P +P
Sbjct: 1059 RAHSQPM--PMQTPATETLNSSRAHSQDMPMQSPATETLNSSRAHPQPMPMQLP 1110
>08_01_0727 +
6567935-6568112,6568197-6568912,6569061-6569162,
6569236-6569547,6569862-6570299
Length = 581
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 129 QEWRGDWHQPRQMDGVPTSQCPRSASGFTLSQSLVE 236
Q W+ + +Q ++DG+P P A+ TL+Q+ E
Sbjct: 34 QSWKVEINQDEEVDGLPKLVMPAGANVLTLAQADTE 69
>04_01_0205 - 2489201-2489630,2489704-2489945
Length = 223
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 369 AQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASLELA 479
AQ PP P P+V + +V PAVA A+L+ A
Sbjct: 81 AQPPAPPTPTPQVSSLPAAHVVAVPAVADELAALDAA 117
>02_02_0051 - 6386618-6386713,6386834-6386959
Length = 73
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 244 AETTSSRCYHPCIIPSETILDARAAPIHRCRRSARARVGITER 372
A T+ RC + T L RA RCRRSAR RV R
Sbjct: 25 AATSGYRC-KLVVDGGHTPLHGRAGARSRCRRSARGRVAFGHR 66
>10_06_0175 -
11490280-11491000,11491869-11491947,11493613-11493811,
11494003-11494044
Length = 346
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 75 SCRVEKIIGRR*GNVMEGQEWRGDWHQPR--QMDGVPTSQCPRSA 203
SC + I R G + + + RGDW R + D QCPR A
Sbjct: 273 SCNLNNTILRSLGRLTKERGGRGDWKDDRRHRRDQWLRQQCPRDA 317
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 279 ARVVASAARGLGRASPPETATG*TR-SRFLDTDSLVHRPFDAAGASRPATPVPPS 118
A ++AA A+ P T +R R D D PF+AA R P PPS
Sbjct: 56 APATSAAAAAAAAAAVPSFLTNPSRIGRHFDEDE--RTPFEAASTPRRPAPSPPS 108
>05_05_0266 - 23694466-23696787,23696885-23697187
Length = 874
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 176 YTVHLTRLVPVAPPLLSLHHISSPP---ADYFFNA 81
Y +HL L A +L+ HH +S P +D+ FNA
Sbjct: 519 YALHLVELTGRASNMLAAHHSASNPGGASDHIFNA 553
>08_02_1595 -
28114751-28114858,28115018-28115283,28116609-28116703,
28117179-28118154,28118245-28118369,28118443-28118569,
28118606-28118843
Length = 644
Score = 27.9 bits (59), Expect = 5.6
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = +3
Query: 147 WHQPRQMDGVPTSQCPRSASGFTLSQS-LVERLGRDHEQ-----PMLPPLHHPIRDNSGC 308
WH + D V P + + L S L++R D +Q P + L HP ++
Sbjct: 133 WHDLSEDDLV----LPAQGNEYILKGSELLDRSPPDRQQNGVGEPKVETLKHPPEESPHS 188
Query: 309 ARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCT 461
S + S S+ + A PP P P+ QQ +Q+ TL P+ + T
Sbjct: 189 RGSQ----EGCSSSSSPSAVTKEASPPPPTPQPQQ-QAQSATLLPSSSAST 234
>08_01_0656 +
5652383-5653009,5653260-5653736,5654969-5655289,
5655434-5655589,5656062-5656127,5656196-5656315
Length = 588
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 270 PPLHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSA 380
PP H ++ GC R +P+ + +S C DH +A
Sbjct: 530 PPDHSNVKLEGGC-REEAAPVSSEVQSICADHAGSTA 565
>05_05_0321 + 24091997-24092530
Length = 177
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 95 NRPAVRKCDGGTGVAGRLAPAASNGRCTNESVSKKRE 205
N P+ R DGG A A AA NG+ S S++ E
Sbjct: 56 NNPSPRGGDGGGDRAAPTAAAAENGQARPSSSSEQEE 92
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 327 PLQALSESTCRDHGAQSAPPPQPIP 401
P A ++T +G Q APPP PIP
Sbjct: 458 PPPAPGQATPPPYGVQYAPPPAPIP 482
>03_05_0738 + 27267514-27268279,27268373-27268395
Length = 262
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 285 PIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQ 410
P RD+ A+ + +P + +T + HG + P P+P R +
Sbjct: 18 PPRDHHHAAKKSPAPSATTTTATRQRHGQEPKPKPKPRARAK 59
>03_05_0051 - 20288456-20291728
Length = 1090
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 276 LHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSA 380
LHH ++++S S SP+ A S R+ GAQ++
Sbjct: 92 LHHQMQESSS-TESNSSPISAFMHSRFRNQGAQAS 125
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 24.6 bits (51), Expect(2) = 6.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 177 VHRPFDAAGASRPATPVPP 121
+H+PF +S P TP PP
Sbjct: 36 LHQPFFPDQSSSPPTPAPP 54
Score = 21.4 bits (43), Expect(2) = 6.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 141 PATPVPPSHFLTAGR 97
PA PVPP TAG+
Sbjct: 62 PALPVPPPPPATAGQ 76
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 363 HGAQSAPPPQPIPRVQQSSSQNVTLHP 443
HG SAPPPQP P+ S + +P
Sbjct: 51 HGYPSAPPPQPQPQPYAHHSAPLQPYP 77
>10_02_0009 + 4128909-4130123
Length = 404
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 315 STYSPLQALSESTCRDHGAQSAPPPQPIPRVQQ 413
S+ +PL+ + ST S PPP P P QQ
Sbjct: 63 SSMAPLRLVLSSTSTSPSPPSPPPPPPPPPPQQ 95
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 191 TLTRWYTVHLTRLVPVAPP-LLSLHHISSP 105
+L R + L RL+ V+PP LL+LH ++SP
Sbjct: 67 SLRRDAVLALARLIKVSPPCLLALHALTSP 96
>07_03_0098 - 13383385-13384392
Length = 335
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 196 EARAGSPCRSLWWRGSAETTSSRCYHPCIIPSE 294
+ G WWR S E+ +R P ++P+E
Sbjct: 188 DENTGDESNDEWWRDSIESPDNRYNSPRLLPNE 220
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 336 ALSESTCRDHGAQSA--PPPQPIPRVQQSSSQNV 431
A S CR G S PPP P+ R Q++ S N+
Sbjct: 81 ARSLLACRREGIGSVRPPPPPPLSRTQRAISHNI 114
>03_05_0509 - 25032494-25033156
Length = 220
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 265 CYHPCIIPSETILDARAAPIHRCRRSARARVG 360
C PC + +L AP CRR+ R R G
Sbjct: 108 CCLPCAVVEVVVLATVRAPAALCRRAVRGRRG 139
>02_05_0266 + 27280592-27281668
Length = 358
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 366 GAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTASLELAALWRSFH 500
GA +APPPQP + SS + P R L + AL H
Sbjct: 43 GAAAAPPPQPPWLLLPSSPSRLFFCPREDRLYPDLRMPALTAEAH 87
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/71 (26%), Positives = 26/71 (36%)
Frame = +3
Query: 243 GRDHEQPMLPPLHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSS 422
GR ++P P P +D + + T D A PPP R SS
Sbjct: 355 GRPPKRPAFAPSAPPAQDRHAQSYDLQYDTDFGEDRTEADSKAIHEPPPMKKSRKAHSSP 414
Query: 423 QNVTLHPAVAR 455
Q +TL A+
Sbjct: 415 QRITLDKPEAK 425
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 102 RR*GNVMEGQEWRGDWHQPRQMDGVPTSQCPRSASGFTLSQSLVERLGRDHEQPMLP 272
RR + + ++ R H PR P+ S+S + S R RD QP P
Sbjct: 116 RRDNSERQREDSRDPGHHPRNRTLEPSDPSSSSSSASSSSSDRHPRRSRDRRQPTAP 172
>08_02_0942 -
22845270-22845570,22845650-22845820,22845903-22846735,
22846817-22847278,22847357-22848090,22848179-22848308
Length = 876
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 110 RKCDGGTGVAGRLAPAASNGR-CTNESVSKKRERVHPVA 223
+KC+ G G G LAP G+ T+ VSK + V A
Sbjct: 597 QKCERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPA 635
>06_03_0526 +
21771519-21771607,21771685-21771810,21771890-21772010,
21772123-21772851,21772954-21773349,21774594-21774665,
21774741-21774803,21775236-21775337
Length = 565
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/91 (24%), Positives = 34/91 (37%)
Frame = +3
Query: 147 WHQPRQMDGVPTSQCPRSASGFTLSQSLVERLGRDHEQPMLPPLHHPIRDNSGCARSTYS 326
W PR+ +S PR A+ F + + R +P P I+ S +
Sbjct: 237 WRPPRRR--ARSSSSPRRATAFKAYNAALSPRARP--RPGAPG-QRMIKTGISLLASVHM 291
Query: 327 PLQALSESTCRDHGAQSAPPPQPIPRVQQSS 419
++ + R +APPP P P SS
Sbjct: 292 QTRSRELAAARQRDTHAAPPPPPPPPPPSSS 322
>03_06_0209 - 32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 27.1 bits (57), Expect = 9.8
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +3
Query: 264 MLPPLHHPIRDNSGCARSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNVTLHP 443
+LP HP+ +A + C + + S P +P SSS+ T P
Sbjct: 1076 LLPESDHPMSAAQSATEDDDEVARA-AMPLCSFYASTSLPVAKPHSLPSSSSSKPYTATP 1134
Query: 444 AVARCTASLELAALWRSFH 500
A A AS +A S H
Sbjct: 1135 APAPTAASASASAAALSLH 1153
>03_06_0007 -
30975910-30975921,30976660-30976747,30976850-30976966,
30977081-30977154
Length = 96
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -1
Query: 251 VSAEPLHQRLRQGEPARASWTLTRWYTVHLTRLVPVAPPLLSLHHISSPPAD 96
++ +P H + PA+ W R H T+ A L + + +PP D
Sbjct: 1 MNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYD 52
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 294 DNSGCARSTYSPLQALSESTCR-DHGAQSAPPPQP 395
D G + YSP QA S HGA PPP P
Sbjct: 1316 DQGGGWHAQYSPGQAPPSSEMSGSHGAGPLPPPSP 1350
>03_01_0037 -
335646-335855,336480-336686,336962-337129,337377-337973
Length = 393
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 378 APPPQPIPRVQQSSSQNVTLHPAVARC 458
A PP+PIP + + + T H VARC
Sbjct: 2 AAPPRPIPSIHRQPPKPTTTH--VARC 26
>02_05_1277 - 35408097-35409080
Length = 327
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/80 (25%), Positives = 30/80 (37%)
Frame = -3
Query: 276 RVVASAARGLGRASPPETATG*TRSRFLDTDSLVHRPFDAAGASRPATPVPPSHFLTAGR 97
R +AA A+ P+T + S L+ D + P D S P P PP G+
Sbjct: 246 RAATTAATTAATATAPDTKKEGSTSINLELDLNLPAPSDEESVSPPPPPPPPVLLALGGQ 305
Query: 96 LFFQRDTINQFSRALIKYRC 37
+ I Q + + C
Sbjct: 306 FNDGKKPILQLTASAALVGC 325
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 312 RSTYSPLQALSESTCRDHGAQSAPPPQPIPRVQQSSSQNVTLHPAVARCTAS 467
R+T S + +T D G + APPP P+PR + + T A ++S
Sbjct: 107 RATSSEARESPHATSVDDGGR-APPPPPLPRPTSARATPATTPSADGSSSSS 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,543,038
Number of Sequences: 37544
Number of extensions: 421810
Number of successful extensions: 2215
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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