Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O19
(506 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 297 7e-81
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 297 7e-81
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 297 7e-81
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 297 7e-81
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 297 7e-81
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 293 1e-79
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 231 4e-61
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 231 4e-61
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 195 3e-50
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 195 3e-50
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 60 2e-09
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 60 2e-09
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 58 7e-09
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 58 7e-09
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.6
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 30 2.1
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 30 2.1
BT001348-1|AAN71103.1| 685|Drosophila melanogaster AT24492p pro... 28 6.3
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916... 28 6.3
AE014297-56|AAN13304.3| 685|Drosophila melanogaster CG9776-PB, ... 28 6.3
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ... 28 6.3
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 297 bits (728), Expect = 7e-81
Identities = 135/162 (83%), Positives = 151/162 (93%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 162
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 297 bits (728), Expect = 7e-81
Identities = 135/162 (83%), Positives = 151/162 (93%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 162
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 297 bits (728), Expect = 7e-81
Identities = 135/162 (83%), Positives = 151/162 (93%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 162
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 297 bits (728), Expect = 7e-81
Identities = 135/162 (83%), Positives = 151/162 (93%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 162
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 297 bits (728), Expect = 7e-81
Identities = 135/162 (83%), Positives = 151/162 (93%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 162
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 293 bits (718), Expect = 1e-79
Identities = 133/160 (83%), Positives = 149/160 (93%)
Frame = +3
Query: 27 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 206
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 207 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 386
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 387 GLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 506
GLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R L
Sbjct: 126 GLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPL 165
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 231 bits (565), Expect = 4e-61
Identities = 105/131 (80%), Positives = 120/131 (91%)
Frame = +3
Query: 114 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 293
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 294 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKED 473
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL KED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 474 DVRRYVVKRLL 506
DVRR+VV+R L
Sbjct: 121 DVRRFVVRRPL 131
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 231 bits (565), Expect = 4e-61
Identities = 105/131 (80%), Positives = 120/131 (91%)
Frame = +3
Query: 114 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 293
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 294 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKED 473
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL KED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 474 DVRRYVVKRLL 506
DVRR+VV+R L
Sbjct: 121 DVRRFVVRRPL 131
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 195 bits (475), Expect = 3e-50
Identities = 98/152 (64%), Positives = 116/152 (76%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD 476
P RLGP R+S I K++ L +EDD
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD 141
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 195 bits (475), Expect = 3e-50
Identities = 98/152 (64%), Positives = 116/152 (76%)
Frame = +3
Query: 21 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 200
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 380
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 381 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD 476
P RLGP R+S I K++ L +EDD
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD 141
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +3
Query: 228 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 407
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 408 PRRLGPKRASKIRKLFNLKKEDD 476
P RLGP R+S I K++ L +EDD
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +3
Query: 228 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 407
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 408 PRRLGPKRASKIRKLFNLKKEDD 476
P RLGP R+S I K++ L +EDD
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 58.0 bits (134), Expect = 7e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +3
Query: 234 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 413
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 414 RLGPKRASKIRKLFNLKKEDD 476
RLGP R+S I K++ L +EDD
Sbjct: 70 RLGPVRSSNISKIYYLCEEDD 90
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 58.0 bits (134), Expect = 7e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +3
Query: 234 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 413
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 414 RLGPKRASKIRKLFNLKKEDD 476
RLGP R+S I K++ L +EDD
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 198 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 67
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 425
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 425
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>BT001348-1|AAN71103.1| 685|Drosophila melanogaster AT24492p
protein.
Length = 685
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 327 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 476
DA LSV+ L + K + + + EVP++ + + KI KL +L K DD
Sbjct: 556 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 606
>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
protein.
Length = 1260
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 327 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 476
DA LSV+ L + K + + + EVP++ + + KI KL +L K DD
Sbjct: 1130 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 1180
>AE014297-56|AAN13304.3| 685|Drosophila melanogaster CG9776-PB,
isoform B protein.
Length = 685
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 327 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 476
DA LSV+ L + K + + + EVP++ + + KI KL +L K DD
Sbjct: 556 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 606
>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
isoform A protein.
Length = 1260
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 327 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 476
DA LSV+ L + K + + + EVP++ + + KI KL +L K DD
Sbjct: 1130 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 1180
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,311,015
Number of Sequences: 53049
Number of extensions: 473059
Number of successful extensions: 1195
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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