Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O18
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.79 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 587 AHASYPGRVRQG*NRLHHP 531
           AH+SYP  ++ G    HHP
Sbjct: 449 AHSSYPAAIQIGHTPHHHP 467


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 410 RGSNPRPQNDICTVIQLRHRGKIKCI 333
           R  NP+P+N +C + +L+     K +
Sbjct: 28  RNKNPQPKNAVCALNELKSGAVYKVV 53


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 340 FILPLWRSCITVQMSF*GLGFDPRVGSSDI 429
           F+L  +  CI   + F G+ +  +VGS +I
Sbjct: 310 FLLMSFGYCIATLLEFAGVHYFTKVGSGEI 339


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 417  PDSGIEPETSERHLYRNTTAPQRQN 343
            P S +E +  ERHL R     Q+Q+
Sbjct: 1072 PHSTLEYKVKERHLMRPRKRDQKQS 1096


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 359 AVVLRYKCRSEVSGSIP 409
           A+  RY+C    +GSIP
Sbjct: 57  ALRFRYECEGRSAGSIP 73


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 359 AVVLRYKCRSEVSGSIP 409
           A+  RY+C    +GSIP
Sbjct: 57  ALRFRYECEGRSAGSIP 73


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 70  VLYKIFNIYIYKGSL*NKNDDRDW 141
           VL    ++Y+Y+ ++ N N   +W
Sbjct: 370 VLLSNNDVYLYQNTMSNNNQRTEW 393


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 70  VLYKIFNIYIYKGSL*NKNDDRDW 141
           VL    ++Y+Y+ ++ N N   +W
Sbjct: 408 VLLSNNDVYLYQNTMSNNNQRTEW 431


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 432 PNIT*PDSGIEPETSERHLY 373
           P++  PD+ +  +T+ RH Y
Sbjct: 457 PDVFDPDNFLPEKTANRHYY 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,958
Number of Sequences: 438
Number of extensions: 4283
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)