Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O17
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin ...    28   5.4  
AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    28   5.4  
AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC...    28   5.4  
AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-P...    28   5.4  
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    28   5.4  
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    28   5.4  

>AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin
           synthase-like protein protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 128 WSYSLVLSLRHDASGENKLNVKFEPGELREA 220
           W+Y +   LRH++SG N    K +  E+  A
Sbjct: 247 WNYEMQYILRHNSSGRNAYTGKLKRKEIHNA 277


>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 154 Q*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 56
           Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 235 QQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC
           protein.
          Length = 832

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 128 WSYSLVLSLRHDASGENKLNVKFEPGELREA 220
           W+Y +   LRH++SG N    K +  E+  A
Sbjct: 252 WNYEMQYILRHNSSGRNAYTGKLKRKEIHNA 282


>AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-PC,
           isoform C protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 154 Q*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 56
           Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 235 QQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 154 Q*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 56
           Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 235 QQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 154 Q*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 56
           Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 235 QQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,592,450
Number of Sequences: 53049
Number of extensions: 268808
Number of successful extensions: 589
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)