Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O06
         (261 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027886-1|AAH27886.1|  355|Homo sapiens guanine nucleotide bind...    28   6.2  
AL355535-1|CAI14668.1|  355|Homo sapiens guanine nucleotide bind...    28   6.2  
AL353794-1|CAH74055.1|  355|Homo sapiens guanine nucleotide bind...    28   6.2  
AL158159-3|CAI40937.1|  355|Homo sapiens guanine nucleotide bind...    28   6.2  
AF493903-1|AAM12617.1|  355|Homo sapiens guanine nucleotide bind...    28   6.2  
AF105201-1|AAD17944.1|  355|Homo sapiens G-protein alpha subunit...    28   6.2  

>BC027886-1|AAH27886.1|  355|Homo sapiens guanine nucleotide binding
           protein (G protein), alpha 14 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


>AL355535-1|CAI14668.1|  355|Homo sapiens guanine nucleotide binding
           protein (G protein), alpha 14 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


>AL353794-1|CAH74055.1|  355|Homo sapiens guanine nucleotide binding
           protein (G protein), alpha 14 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


>AL158159-3|CAI40937.1|  355|Homo sapiens guanine nucleotide binding
           protein (G protein), alpha 14 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


>AF493903-1|AAM12617.1|  355|Homo sapiens guanine nucleotide binding
           protein alpha 14 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


>AF105201-1|AAD17944.1|  355|Homo sapiens G-protein alpha subunit 14
           protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 27  ENGNRSSWLLFYGSIIQIVFICCVSNYDKLL 119
           +   R  W+  + S+  I+F+  +S YD++L
Sbjct: 205 QRSERRKWIHCFESVTSIIFLVALSEYDQVL 235


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,634,576
Number of Sequences: 237096
Number of extensions: 469827
Number of successful extensions: 642
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)