Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O06
(261 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 26 0.066
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 26 0.066
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 26 0.066
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 26 0.066
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 26 0.066
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.20
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.20
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 0.62
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 1.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 2.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 2.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 2.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 2.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 2.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 2.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 2.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 2.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 4.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 19 7.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 19 7.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 19 7.6
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 26.2 bits (55), Expect = 0.066
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY C L+YNI +
Sbjct: 99 NYNNNNYNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.066
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY C L+YNI +
Sbjct: 99 NYNNNNYNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.066
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY C L+YNI +
Sbjct: 99 NYNNNNYNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.066
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY C L+YNI +
Sbjct: 99 NYNNNNYNNNCKKLYYNINY 118
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.066
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNI 191
N + NNY C L+YNI
Sbjct: 341 NNYNNNYNNNCKKLYYNI 358
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.20
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 65 IYNTNSVYLLCVKLR*TSVILINLQ 139
+ NT+ V +C+KL+ + +I +NL+
Sbjct: 47 VVNTSDVLRVCIKLKLSQLIDVNLK 71
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.20
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 65 IYNTNSVYLLCVKLR*TSVILINLQ 139
+ NT+ V +C+KL+ + +I +NL+
Sbjct: 47 VVNTSDVLRVCIKLKLSQLIDVNLK 71
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 0.62
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY L+YNI +
Sbjct: 338 NNYNNNYNNNYKKLYYNINY 357
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 1.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY L+YNI +
Sbjct: 95 NNYNNNYNNYNKKLYYNINY 114
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 92 NNYNNNYKP----LYYNINY 107
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 92 NNYNNNYKP----LYYNINY 107
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 92 NNYNNNYKP----LYYNINY 107
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 92 NNYNNNYKP----LYYNINY 107
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 325 NNYNNNYKP----LYYNINY 340
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 325 NNYNNNYKP----LYYNINY 340
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 325 NNYNNNYKP----LYYNINY 340
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L+YNI +
Sbjct: 314 NNYNNNYKP----LYYNINY 329
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 4.4
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NN L+YNI +
Sbjct: 94 NNYNNNNYNNYKKLYYNINY 113
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 19.4 bits (38), Expect = 7.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNI 191
N + NNY L+YNI
Sbjct: 321 NYNYNNYNNNYKPLYYNI 338
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.4 bits (38), Expect = 7.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 138 NTHRNNYLPKCSSLFYNIRF 197
N + NNY P L YNI +
Sbjct: 325 NNYNNNYKP----LHYNINY 340
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.4 bits (38), Expect = 7.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 197 WDINTIKTIK 226
W + T+KTIK
Sbjct: 508 WGVKTMKTIK 517
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,396
Number of Sequences: 438
Number of extensions: 1238
Number of successful extensions: 32
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4762122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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