Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O02
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 33 0.003
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 33 0.003
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 3.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.2
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 21 9.2
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 21 9.2
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.003
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +1
Query: 223 ASPKYYAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DADKYKNVMHGFKVSV 378
A P +A + T V P++ VK LQV + +YK ++ F
Sbjct: 5 ADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIP 64
Query: 379 REEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVAYSGMLDEETAYSYRTLVYLASSAS 558
+E+G +G I Y F + +K + G +D+ T + + LAS +
Sbjct: 65 KEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGA 124
Query: 559 A 561
A
Sbjct: 125 A 125
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.003
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +1
Query: 223 ASPKYYAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DADKYKNVMHGFKVSV 378
A P +A + T V P++ VK LQV + +YK ++ F
Sbjct: 5 ADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIP 64
Query: 379 REEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVAYSGMLDEETAYSYRTLVYLASSAS 558
+E+G +G I Y F + +K + G +D+ T + + LAS +
Sbjct: 65 KEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGA 124
Query: 559 A 561
A
Sbjct: 125 A 125
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 143 PPHSPQHTMT 172
PPHSPQ T+T
Sbjct: 1366 PPHSPQITLT 1375
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 355 MHGFKVSVREEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVAYSGM 498
+HG+ + + E + T Y+L+ L Y+++ AY+G+
Sbjct: 1396 IHGYTIHYKPEFGDWDTAQISSTVQKYTLENLLCGSRYQIYVTAYNGI 1443
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 40 SYFLSDLKHNNVSSLL 87
SYFL+D KH +V L
Sbjct: 665 SYFLNDYKHKDVDVTL 680
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 282 PHRGGAPRPGQVPASG 329
P RG P P Q P G
Sbjct: 34 PQRGSPPNPSQGPPPG 49
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 423 FHWLLASGSVQVR 461
FHW L S SV+++
Sbjct: 1542 FHWTLVSNSVKMQ 1554
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 423 FHWLLASGSVQVR 461
FHW L S SV+++
Sbjct: 1538 FHWTLVSNSVKMQ 1550
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.0 bits (42), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 YFLSDLKHNNVSSLLETARNSPF-RGPLSPAQCQTS 147
YF SDL + SS E A P + P++ + +T+
Sbjct: 309 YFSSDLSESETSSDEEEADTRPLKKEPITQSNKRTA 344
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 260 VSCLAV*PTPRWCPSTWSSAGFR 328
+SC+A P PR P + +G R
Sbjct: 387 MSCVACSPPPRQTPPSRKESGRR 409
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 110 NGEFRAVSNSDETLLCF 60
+G+FR DE L+C+
Sbjct: 55 DGQFRGEFPQDERLMCY 71
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 110 NGEFRAVSNSDETLLCF 60
+G+FR DE L+C+
Sbjct: 29 DGQFRGEFPQDERLMCY 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,984
Number of Sequences: 438
Number of extensions: 3200
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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