Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_O01
(123 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 34 0.072
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 34 0.072
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 34 0.072
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 34 0.072
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 34 0.072
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 34 0.072
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 34 0.072
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 34 0.072
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MGREDKATWKSNYFVK 122
M RED+ATWKSNYF+K
Sbjct: 1 MPREDRATWKSNYFLK 16
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,029,354
Number of Sequences: 237096
Number of extensions: 244944
Number of successful extensions: 497
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 76,859,062
effective HSP length: 21
effective length of database: 71,880,046
effective search space used: 1365720874
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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