Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O01
         (123 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    28   1.6  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    28   1.6  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    28   1.6  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    28   1.6  
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    27   4.8  
AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p pro...    26   8.4  
AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA...    26   8.4  
AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB...    26   8.4  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVK 122
           M RE+KA WK+ YF+K
Sbjct: 1   MVRENKAAWKAQYFIK 16


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVK 122
           M RE+KA WK+ YF+K
Sbjct: 1   MVRENKAAWKAQYFIK 16


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVK 122
           M RE+KA WK+ YF+K
Sbjct: 1   MVRENKAAWKAQYFIK 16


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVK 122
           M RE+KA WK+ YF+K
Sbjct: 1   MVRENKAAWKAQYFIK 16


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 36  LKFLRSPYFTQSKMGREDKATW 101
           ++F+RS YFT     R  K TW
Sbjct: 891 IQFMRSKYFTYGNYSRYPKYTW 912


>AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p
           protein.
          Length = 834

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLK 123
           + S+NF E  T   P+++GRT +  +P+T  K
Sbjct: 339 IASINFDE--TDSYPQFIGRTSVCNTPMTENK 368


>AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA,
           isoform A protein.
          Length = 858

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLK 123
           + S+NF E  T   P+++GRT +  +P+T  K
Sbjct: 363 IASINFDE--TDSYPQFIGRTSVCNTPMTENK 392


>AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB,
           isoform B protein.
          Length = 834

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLK 123
           + S+NF E  T   P+++GRT +  +P+T  K
Sbjct: 339 IASINFDE--TDSYPQFIGRTSVCNTPMTENK 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,136,662
Number of Sequences: 53049
Number of extensions: 74107
Number of successful extensions: 159
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 24,988,368
effective HSP length: 21
effective length of database: 23,874,339
effective search space used: 453612441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)