Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_O01
         (123 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   1.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   2.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   2.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   2.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   2.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   2.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   2.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   3.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   3.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   3.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   3.2  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    19   7.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    19   7.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    19   7.3  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    19   7.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   7.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   7.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    18   9.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    18   9.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    18   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    18   9.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 25  FVLSLNFSEVPTSLN 69
           FV+ + F+ VP+SLN
Sbjct: 75  FVIIMKFNGVPSSLN 89


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -2

Query: 122 FNE-VIGLPGSLVLP 81
           +NE + G PG L+LP
Sbjct: 593 YNERIFGFPGRLLLP 607


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -2

Query: 122 FNE-VIGLPGSLVLP 81
           +NE + G PG L+LP
Sbjct: 593 YNERIFGFPGRLLLP 607


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 25  FVLSLNFSEVPTSLN 69
           FV  L ++ VP+SLN
Sbjct: 77  FVTMLRYNGVPSSLN 91


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 25  FVLSLNFSEVPTSLN 69
           FV  L ++ VP+SLN
Sbjct: 77  FVTMLRYNGVPSSLN 91


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 25  FVLSLNFSEVPTSLN 69
           FV  L ++ VP+SLN
Sbjct: 77  FVTMLRYNGVPSSLN 91


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 86  LPTHLGLSEVGTSEKFKDKTNLVPN 12
           + TH+GL    ++  +KDK  +  N
Sbjct: 321 IATHMGLDTRTSTSLWKDKAMIEAN 345


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 72  KMGREDKATW 101
           K+G E+KA W
Sbjct: 332 KLGEEEKADW 341


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 72  KMGREDKATW 101
           K+G E+KA W
Sbjct: 332 KLGEEEKADW 341


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 72  KMGREDKATW 101
           K+G E+KA W
Sbjct: 332 KLGEEEKADW 341


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 33  VLKFLRSPYFTQSKM 77
           +LKFL+  Y   SK+
Sbjct: 343 ILKFLKQKYVKNSKL 357


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 324 GNRRAKGMELQEKSSKSLLANVLD 347


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 392 GNRRAKGMELQEKSSKSLLANVLD 415


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 5   GRNSARGLSCP*ISPKSLLHSIQD 76
           G   A+G+     S KSLL ++ D
Sbjct: 392 GNRRAKGMELQEKSSKSLLANVLD 415


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWV 81
           VL++NF    T    RWV
Sbjct: 320 VLNVNFRSPVTHRMARWV 337


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 16  GTRFVLSLNFSEVPTSLN 69
           G  FV  L    VP+SLN
Sbjct: 75  GKTFVTILRNDGVPSSLN 92


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 54  PYFTQSKMGRED 89
           PY   SK+GR++
Sbjct: 143 PYSPNSKIGRDE 154


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 111 NWTSR*PCPPYPSWIE*SRD 52
           NW +  P    P+W+  + D
Sbjct: 329 NWMTYMPPSGIPNWVPGNHD 348


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 4   WQEFGTRFVLSLNFSEVPTSLNPRWVGRTRL 96
           W +  T  +L  + S    SL+  W+ R+ +
Sbjct: 775 WADAVTLAILDFHESGFMESLDNHWILRSNV 805


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 16  GTRFVLSLNFSEVPTSLN 69
           G  FV    +  VP+SLN
Sbjct: 78  GMTFVTVPRYKGVPSSLN 95


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 111 NWTSR*PCPPYPSWIE*SRD 52
           NW +  P    P+W+  + D
Sbjct: 329 NWMTYMPPSGIPNWVPGNHD 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,184
Number of Sequences: 438
Number of extensions: 493
Number of successful extensions: 26
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 21
effective length of database: 137,145
effective search space used:  2605755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)