Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N22
(489 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 66 3e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 58 5e-10
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 54 1e-08
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 54 2e-08
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 52 4e-08
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 47 1e-06
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 32 0.040
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 0.28
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 29 0.28
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 28 0.87
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 1.1
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 27 1.5
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 3.5
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 25 4.6
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 6.1
SPBC19C2.02 |pmt1||DNA methyltransferase homolog|Schizosaccharom... 25 6.1
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 25 8.1
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 66.1 bits (154), Expect = 3e-12
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDST 359
GN+ K+Y+ AL +Y +AI++ P + YY NR+A Y LG ++ A+EDA ++LD
Sbjct: 90 GNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPH 149
Query: 360 FTKGYIRIAKCCIALGDLSGGEQAVRR 440
+ + R+ + ++LGD + A ++
Sbjct: 150 HARAFGRLGRAKLSLGDAAAAADAYKK 176
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 58.4 bits (135), Expect = 5e-10
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDST 359
GN L+K ++ A+ Y E K P + +GNR+A Y+ + + + D K + LD
Sbjct: 406 GNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCNKAIELDPN 465
Query: 360 FTKGYIRIAKCCIALGDLSGGEQAVRRASEL 452
F K Y+R A+ L D + A ASE+
Sbjct: 466 FAKAYVRKAQALFMLKDYNKCIDACNEASEV 496
Score = 57.2 bits (132), Expect = 1e-09
Identities = 32/84 (38%), Positives = 40/84 (47%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDST 359
GN + K+YK A+ + +AI L N Y NRSACY Y AL+DA K L
Sbjct: 9 GNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPD 68
Query: 360 FTKGYIRIAKCCIALGDLSGGEQA 431
+ KG+ R LGDL A
Sbjct: 69 WAKGWSRKGAALHGLGDLDAARSA 92
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 54.0 bits (124), Expect = 1e-08
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAI-KLCPEN---AAYYGNRSACYMMLGMYKKALEDAQKTVA 347
GN + K YK A Y +A+ + C + A Y NR+AC ++ Y++ L D + +
Sbjct: 71 GNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYRQVLNDCAQVLQ 130
Query: 348 LDSTFTKGYIRIAKCCIALGDLSGGEQAVRRAS 446
DST K Y R AK +AL ++ +R S
Sbjct: 131 RDSTHAKAYYRSAKALVALKRYDEAKECIRLCS 163
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 53.6 bits (123), Expect = 2e-08
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDST 359
GN Y K Y A+ Y +AI C + ++ NR+ACY +G +++ ++D + ++LDS+
Sbjct: 158 GNKAYGQKEYANAIDYYTQAIT-CSHDPIFFSNRAACYAAIGDFEQVIKDTSEALSLDSS 216
Query: 360 FTKGYIRIAKCCIALGDL 413
+ K R + LG L
Sbjct: 217 YVKALNRRSAAYEQLGKL 234
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 52.4 bits (120), Expect = 4e-08
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRSACYMMLGMYKKALEDAQKTVA 347
GN L++ NY+ A Y EA+++ P+N A Y NR+ + L ++AL D+ +A
Sbjct: 230 GNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSDNALA 289
Query: 348 LDSTFTKGYIRIAKCCIALGDLSGGEQAVRRASELGGAD 464
+DS++ KG AK AL + V+ A EL +D
Sbjct: 290 IDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASD 328
Score = 50.4 bits (115), Expect = 1e-07
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCPENAA--YYGNRSACYMMLGMYKKALEDAQKTVALD 353
GN YK K Y A+ Y EAI L ++A YY NR+A YM +G ++ AL DA+++ +
Sbjct: 30 GNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAKQSDRIK 89
Query: 354 STFTKGYIRIAKCCIALGDLSGGE 425
K RI + L L+ E
Sbjct: 90 PDVPKTQSRIRQAYEGLSILNEAE 113
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 47.2 bits (107), Expect = 1e-06
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +3
Query: 216 ALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDSTFTKGYIRIAKCC 395
A+ +Y +AI+L NA Y NRS ++ Y A+ DA K + D + K Y R A
Sbjct: 24 AIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAH 83
Query: 396 IALGDLSGGEQAVRRASELGGADCATSER 482
IA+ R+A L +D A ++
Sbjct: 84 IAIFQPKEAVGDFRKALALAPSDPAARKK 112
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 32.3 bits (70), Expect = 0.040
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 201 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALDST 359
K+Y +L Y A+ + P N + + + + LG+Y+ ++ + + LDS+
Sbjct: 90 KDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSS 142
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.5 bits (63), Expect = 0.28
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 180 GNHLYKFKNYKGALAMYDEAIKLCP----ENAAYYGNRSACYMMLGMYKKALEDAQKTV 344
GN L++ ++ A+ + ++ P + NRS CY +G K L+D + V
Sbjct: 419 GNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQDVDELV 477
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 29.5 bits (63), Expect = 0.28
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 201 KNYKGALAMYDEAIKLCPENAA-YYGNRSACYMMLGMYKKALEDAQKTVALDSTFTKGYI 377
+ ++ AL + I+ P + R+ Y G Y +A DA++ + L++ +GY+
Sbjct: 20 RKFEDALTFITKTIEQEPNPTIDLFELRAQVYEKSGQYSQAELDAKRMIHLNARNARGYL 79
Query: 378 RIAK 389
R+ K
Sbjct: 80 RLGK 83
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.9 bits (59), Expect = 0.87
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 201 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVAL 350
K+YK AL YD A KL +++ ++ ++L + KAL + ++ A+
Sbjct: 547 KDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAI 596
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +3
Query: 201 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLGMYKKALEDAQKTVALD 353
KN+ A+ + A+++ P++ + Y G Y AL+ + LD
Sbjct: 664 KNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILD 714
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 1.5
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = +1
Query: 184 ITYTNLKIIRVPLLCMMKPLSYAQKMQHTTEIDLHVT*CLVCTRKLWKMRKKQWLWIPHL 363
I++T + ++ V +C +K K E L CLVCT L + W +
Sbjct: 79 ISFTPIYVLNVLAICYLKYKDAFFKNYGAAEWTLFGFWCLVCTLALIFLTYFYETWTKAV 138
Query: 364 QKDTYVLQNVALHWVIYL 417
+ L N WV+ +
Sbjct: 139 KVTAVGLYNSRKKWVVII 156
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 348 EPLFFAHLPKLSCTYQA-SCNMQIYFRSMLHFLGIA*WLHH 229
E L + +P+L Q+ S I + + HFL I WL H
Sbjct: 1576 EELPYIMIPRLESNIQSLSWKQHIATKMIQHFLAIGSWLFH 1616
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.4 bits (53), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 316 KLWKMRKKQWLWIPHLQKDTYVLQNVA 396
+LWK QWL +P + T ++ VA
Sbjct: 351 RLWKQDAGQWLQLPSISGHTKSVKGVA 377
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 189 LYKFKNYKGALAMYDEAIKLCPENA 263
L + K Y A+ YD+AIK P+NA
Sbjct: 644 LKRQKLYIKAIQSYDQAIKFDPKNA 668
>SPBC19C2.02 |pmt1||DNA methyltransferase
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 370 PFVNVESRATVFCASSKAFLYIPSIM*HADLFP*Y 266
PF + +R + S+AFL I +++ H + P Y
Sbjct: 83 PFTRIGNRKDILDPRSQAFLNILNVLPHVNNLPEY 117
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 24.6 bits (51), Expect = 8.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 303 GMYKKALEDAQKTVALDSTF 362
G+ +K ++AQKTV LD+T+
Sbjct: 16 GVLQKLKDNAQKTVLLDATW 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,785,127
Number of Sequences: 5004
Number of extensions: 32525
Number of successful extensions: 100
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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