Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_N21
         (491 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    30   2.0  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    30   2.0  
AF541947-1|AAN34649.1|  404|Drosophila melanogaster gag protein ...    29   4.5  
AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-P...    28   6.0  

>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   RGTEGRTPCQCGTH-PGVKRPEIPSKTPRGRPPHLVWGRHG 122
           +G  G  P + G H PG   P     TP G PP   WG  G
Sbjct: 84  QGRPGMGPNRGGMHRPGFAPPNRQQPTPPGWPPGWQWGAGG 124


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   RGTEGRTPCQCGTH-PGVKRPEIPSKTPRGRPPHLVWGRHG 122
           +G  G  P + G H PG   P     TP G PP   WG  G
Sbjct: 84  QGRPGMGPNRGGMHRPGFAPPNRQQPTPPGWPPGWQWGAGG 124


>AF541947-1|AAN34649.1|  404|Drosophila melanogaster gag protein
           protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 314 NENNKDEKFICRXENFVFRNNKK 246
           N NN D +FI R +NF   NN++
Sbjct: 313 NSNNNDSRFIQRQQNFNNNNNRR 335


>AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-PA
           protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 166 ISIGIICTKTV*AIIAYVITVHCTVI-FFLLFRKTKFSXLHINFSSLLFSF 315
           IS+G++    +   ++Y + V  T+   F+ F  T F+  HIN S ++F F
Sbjct: 146 ISLGMLLFNVIYLCVSYSLLVSATISPSFVTF--TTFALPHINISLMVFKF 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,290,776
Number of Sequences: 53049
Number of extensions: 484831
Number of successful extensions: 1540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)