BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N19
(271 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p pro... 27 3.6
AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p pro... 27 3.6
AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-P... 27 3.6
AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-P... 27 3.6
BT003232-1|AAO24987.1| 328|Drosophila melanogaster LP07794p pro... 26 6.3
AE014134-2384|AAF53323.1| 328|Drosophila melanogaster CG9014-PA... 26 6.3
AY071072-1|AAL48694.1| 562|Drosophila melanogaster RE14504p pro... 26 8.3
AE013599-1554|AAF58475.1| 542|Drosophila melanogaster CG8646-PA... 26 8.3
>BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p
protein.
Length = 322
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 113 ND*ELILSICYRILICNIY 57
N+ +L+L ICY++L CN +
Sbjct: 240 NEIDLVLDICYQLLRCNTH 258
>AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p
protein.
Length = 301
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 113 ND*ELILSICYRILICNIY 57
N+ +L+L ICY++L CN +
Sbjct: 219 NEIDLVLDICYQLLRCNTH 237
>AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-PB,
isoform B protein.
Length = 301
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 113 ND*ELILSICYRILICNIY 57
N+ +L+L ICY++L CN +
Sbjct: 219 NEIDLVLDICYQLLRCNTH 237
>AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-PA,
isoform A protein.
Length = 334
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 113 ND*ELILSICYRILICNIY 57
N+ +L+L ICY++L CN +
Sbjct: 252 NEIDLVLDICYQLLRCNTH 270
>BT003232-1|AAO24987.1| 328|Drosophila melanogaster LP07794p
protein.
Length = 328
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 13 SDSCRRLFCKNCLEK*MLQIKI 78
S C FC+ C++K M+Q +I
Sbjct: 31 SSECEHAFCRACIDKWMIQKQI 52
>AE014134-2384|AAF53323.1| 328|Drosophila melanogaster CG9014-PA
protein.
Length = 328
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 13 SDSCRRLFCKNCLEK*MLQIKI 78
S C FC+ C++K M+Q +I
Sbjct: 31 SSECEHAFCRACIDKWMIQKQI 52
>AY071072-1|AAL48694.1| 562|Drosophila melanogaster RE14504p
protein.
Length = 562
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 161 DINSHYTFSVFTDYYPKILA 220
D++ HYT V TD+ K++A
Sbjct: 181 DLHGHYTTDVITDHSVKVIA 200
>AE013599-1554|AAF58475.1| 542|Drosophila melanogaster CG8646-PA
protein.
Length = 542
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 161 DINSHYTFSVFTDYYPKILA 220
D++ HYT V TD+ K++A
Sbjct: 161 DLHGHYTTDVITDHSVKVIA 180
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,400,449
Number of Sequences: 53049
Number of extensions: 133049
Number of successful extensions: 228
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 24,988,368
effective HSP length: 68
effective length of database: 21,381,036
effective search space used: 449001756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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