Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_N19
         (271 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   3.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    20   4.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   6.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   6.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   6.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   8.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    19   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   8.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    19   8.2  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 3.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 68  CNIYFSKQFLQNNL 27
           CNIY +   ++NNL
Sbjct: 375 CNIYNASSRMENNL 388


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +2

Query: 152 RMPDINSHYTFSVFTDYYPKILAGILLYLKNFALYISLWM 271
           +MP++   Y  S+    +  +L  IL YL+   +    W+
Sbjct: 302 QMPNLMVFYEKSLALAAFSLMLTSILRYLQELHVDAPTWI 341


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 2   HEDNLIVVEGCFVKTV 49
           +EDN+ + E C + T+
Sbjct: 120 YEDNIFLPEDCLLFTI 135


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 2   HEDNLIVVEGCFVKTV 49
           +EDN+ + E C + T+
Sbjct: 135 YEDNIFLPEDCLLFTI 150


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 255 YKAKFFRYNNIP 220
           Y  KFFRY   P
Sbjct: 242 YNTKFFRYRITP 253


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization
          protein protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 25 RRLFCKNCLEK 57
          RR   +NCLEK
Sbjct: 60 RRAHLRNCLEK 70


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 28 RLFCKNCL 51
          R FC+NC+
Sbjct: 32 RAFCRNCI 39


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 28  RLFCKNCL 51
           R FC+NC+
Sbjct: 480 RAFCRNCI 487


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 38  VKTV*KNKCYKLKFYSIWTKLIPN 109
           +K     K   L+FY++  KLI N
Sbjct: 545 IKDEANKKGVSLRFYNVVYKLIDN 568


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,854
Number of Sequences: 438
Number of extensions: 853
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)