Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N17
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656... 62 2e-10
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 61 5e-10
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 36 0.020
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 33 0.11
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 31 0.43
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 31 0.57
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 30 0.75
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 30 0.99
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 29 1.3
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 29 1.3
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047... 29 1.3
01_05_0368 + 21434398-21434415,21434521-21434553,21437074-21437391 29 2.3
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 3.0
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 28 4.0
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 28 4.0
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187... 28 4.0
01_05_0162 + 18759647-18759663,18760128-18760131,18760270-187606... 27 5.3
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 27 7.0
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 27 9.2
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 27 9.2
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 27 9.2
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 27 9.2
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 27 9.2
>07_03_1410 +
26363538-26363777,26365421-26365475,26365553-26365644,
26365732-26365787,26366026-26366101,26366790-26366856,
26367197-26367263,26368276-26368342,26368759-26368842,
26369749-26369904,26370641-26370718,26371323-26371391,
26371476-26371541,26371623-26371751,26372862-26372951,
26373306-26373371,26373768-26373836,26373903-26374007,
26374374-26374499,26374687-26374745,26374832-26374868,
26375370-26375519
Length = 667
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Frame = +2
Query: 101 LINIFKSILSKSYDSKTKLWNF---SVDDYQDLMSNVATLAPHVVLGNLPLSVLKVLREP 271
L++ I S++ K ++W F S+ ++++S V +A V + L V + L
Sbjct: 131 LVDAVHKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIA--VEVQKLDPLVKRALTAS 188
Query: 272 TIDPNLIDLT-PVEETLRCKLMPFQYEGVRFGIARRGRCMIPDDMGLGKTFQALGIAS 442
+L DL + + KLMPFQ EGVRF + R +I D+MGLGKT QA+ +AS
Sbjct: 189 LYAGDLRDLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVAS 246
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 60.9 bits (141), Expect = 5e-10
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Frame = +2
Query: 164 FSVDDYQDLMSNVATLAPHVVLGNLPLSVLKVLR-------EPTIDPNLID--LTPVEET 316
F + DY+ ++ + L P V + ++P V++ E +D L + +
Sbjct: 135 FKLMDYEPVLKCLKKL-PGVAVQDIPYKTRNVIKNLPKFFAESCASDKEVDGLLMKLPQH 193
Query: 317 LRCKLMPFQYEGVRFGIARRGRCMIPDDMGLGKTFQALGIAS 442
LR L+PFQ EGV+FG+ R GRC+I D+MGLGKT Q + S
Sbjct: 194 LRDALLPFQLEGVKFGLRRHGRCLIADEMGLGKTLQHFSLLS 235
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +2
Query: 305 VEETLRCKLMPFQYEGVRF--GIARRGRC-MIPDDMGLGKTFQALGIAS 442
V ++ C+L+ Q +GVRF + R ++ DDMGLGKT Q + S
Sbjct: 124 VPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLS 172
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 266 EPTIDPNLIDLTPVEETLRCKLMPFQYEGVRF-GIARRGRC--MIPDDMGLGKTFQALGI 436
E +D + ID + L +L +Q EG+ + RR + ++ DDMGLGKT QA I
Sbjct: 1781 EQLLDNSQIDDYKLSIDLSVELRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAI 1840
Query: 437 AS 442
+
Sbjct: 1841 VA 1842
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
+L P+Q EG+++ ++ + + D+MGLGKT Q + + +Y
Sbjct: 464 ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 506
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 329 LMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
L P+Q EG+ R+ R ++ D+MGLGKT Q++
Sbjct: 235 LHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSI 271
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRF---GIARRGRCMIPDDMGLGKTFQALGIASY 445
KL +Q EG+ F G ++ D+MGLGKT Q++ + +
Sbjct: 596 KLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGF 638
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Frame = +2
Query: 305 VEETLRCKLMPFQYEGVRF------GIARR---GRCMIPDDMGLGKTFQAL 430
V+ L L P Q EGV+F G+ C++ DDMGLGKT Q++
Sbjct: 227 VDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRFGIA--RRG-RCMIPDDMGLGKTFQALGIASY 445
KL +Q +GV++ I+ + G ++ D MGLGKT Q +G ++
Sbjct: 281 KLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAH 323
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 329 LMPFQYEGVRFGIARR----GRCMIPDDMGLGKTFQAL 430
L P+Q GV F + G ++ D+MGLGKT QA+
Sbjct: 325 LKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAV 362
>03_05_0952 +
29103879-29103983,29104103-29104600,29104693-29104794,
29105552-29105898,29105967-29106153,29106242-29106417,
29106976-29107065,29107066-29107322,29107593-29107687,
29107801-29107920,29108111-29108230,29108410-29108508,
29108588-29108689,29108884-29109111
Length = 841
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRFGIA--RRG-RCMIPDDMGLGKTFQALGIASY 445
KL +Q +GV++ I+ + G ++ D MGLGKT Q +G ++
Sbjct: 281 KLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAH 323
>01_05_0368 + 21434398-21434415,21434521-21434553,21437074-21437391
Length = 122
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 363 PNLTPSY*NGISLQRNVSSTGVKSIKLGSIVGSLNTFNTDNG 238
P+ PS N + Q N +TG GS S T NT+ G
Sbjct: 69 PSTAPSTPNPATPQTNALATGTSGTPSGSAAQSSGTINTNRG 110
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
KL +Q G+R+ ++ + + D+MGLGKT Q + + Y
Sbjct: 1027 KLREYQMNGLRWLVSLYNNNLNGILADEMGLGKTVQVISLLCY 1069
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 218 HVVLGNLPLSVLKVL-REPTIDPNLIDLT 301
H+++G LPL V+ VL +P ++ +L +LT
Sbjct: 328 HMIIGGLPLLVISVLNHDPALNGHLQELT 356
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 275 IDPNLIDLTPVEETLRCKLMPFQYEGVRFGIAR---RGRCMIPDDMGLGKTFQAL 430
I +D + +EE L +Q +G+++ I R ++ D+MGLGKT Q +
Sbjct: 516 ISQTCLDGSKIEEVHCGALYDYQLQGLQWLIDNFKTRRSVILADEMGLGKTVQVV 570
>01_06_0006 -
25517892-25517935,25518156-25518276,25518598-25518733,
25519189-25519280,25519358-25519426,25519710-25519821,
25519897-25520015,25520302-25520355,25520811-25520891,
25520968-25521051,25521124-25521315,25521633-25521746,
25521832-25521978,25522066-25522302,25522762-25522810,
25522894-25523027,25523124-25523324,25523532-25523701,
25523773-25523875,25524198-25524361,25525015-25525055,
25525144-25525187
Length = 835
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 329 LMPFQYEGV----RFGIARRGRCMIPDDMGLGKTFQA 427
L P Q +G+ R + G ++ DDMGLGKT QA
Sbjct: 206 LFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQA 242
>01_05_0162 +
18759647-18759663,18760128-18760131,18760270-18760617,
18760801-18761016,18763367-18763435,18763560-18764209,
18764993-18765089,18765170-18765223,18765305-18765435,
18766818-18767008,18767937-18768574
Length = 804
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 405 PMSSGIIHRPRRAIPNLTPSY*NGISLQRN--VSSTGVKSIKLGSIVGSLNT 256
P+ +++ R +P+ PS+ +G +QR+ S G + LG VG T
Sbjct: 262 PLVGSAVYKAFRPLPHSWPSFPDGSEIQRSSRPSKYGATELLLGLSVGEKET 313
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 2 HEVSVPVTKVVSGTIYLISEDRFE----VNPSEFCAPLINIFKSILSKSYDSKTKLWN 163
H+ V + +VSGTI S R+ VNP+EF A LI++ S S+ ++ N
Sbjct: 259 HQPRVVIFVLVSGTIQN-SSVRYHCPDHVNPAEFLADLISVDYSSAESVQSSRKRIEN 315
>05_06_0219 +
26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 YLISEDRFEVNPSEFCAPLINIFKSILSKSY-DSKTKLWNFSVDDYQDLMSNVATLAPHV 223
Y++ E + +N S C+ + +F S+ ++ SK+ + N DLM +++ PH
Sbjct: 607 YVVVEHQELLNAST-CSFVSGLFPSVQEENTKSSKSSIANRFKGQLHDLMETLSSTEPHY 665
Query: 224 VLGNLPLSVLK 256
+ P ++LK
Sbjct: 666 IRCIKPNNLLK 676
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 386 MIPDDMGLGKTFQALGIASY 445
++ D+MGLGKT Q + + Y
Sbjct: 307 ILADEMGLGKTLQTISLLGY 326
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +2
Query: 329 LMPFQYEGVRF--GIARRGRC-MIPDDMGLGKTFQ 424
L P Q EG+R+ + RG ++ DDMGLGKT Q
Sbjct: 280 LYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQ 314
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 386 MIPDDMGLGKTFQALGIASY 445
++ D+MGLGKT Q + + +Y
Sbjct: 984 ILADEMGLGKTVQVMSLIAY 1003
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 386 MIPDDMGLGKTFQALGIASY 445
++ D+MGLGKT Q + + Y
Sbjct: 253 ILADEMGLGKTLQTISLLGY 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,809,784
Number of Sequences: 37544
Number of extensions: 192762
Number of successful extensions: 524
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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