Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N17
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 73 1e-13
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 73 1e-13
U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 0.68
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 0.68
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 30 0.68
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 30 0.89
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 30 0.89
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 30 0.89
Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 29 1.6
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 1.6
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 2.1
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 29 2.1
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 2.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 2.1
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 29 2.1
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 29 2.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 29 2.1
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 28 3.6
U41019-5|ABN43092.1| 134|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 4.8
Z81520-1|CAB04223.1| 399|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z54271-4|CAA91034.1| 259|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 27 8.3
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 27 8.3
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 27 8.3
AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical ... 27 8.3
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 72.9 bits (171), Expect = 1e-13
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +2
Query: 62 DRFEVNPSEFCAPLINIFKSILSKSYDSKTKLWNFSVDDYQDLMSNVA--TLAPHVVLGN 235
DR ++ F + +I++ K + S++YD + W + D+ + SN+ A V L
Sbjct: 106 DRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITI-SNILKNATAVKVELEP 164
Query: 236 LPLSVLKVLR-EPTIDPNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRCMIPDDMGLG 412
LP +++ + +P P+ ++ T ++ +L +L P+Q EGV F + R GR ++ D+MGLG
Sbjct: 165 LPQNIIGLTNFKPKAAPSDLN-TVMDPSLIERLFPYQKEGVIFALERDGRILLADEMGLG 223
Query: 413 KTFQALGIASYY 448
K+ QAL IA YY
Sbjct: 224 KSVQALTIARYY 235
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 72.9 bits (171), Expect = 1e-13
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +2
Query: 62 DRFEVNPSEFCAPLINIFKSILSKSYDSKTKLWNFSVDDYQDLMSNVA--TLAPHVVLGN 235
DR ++ F + +I++ K + S++YD + W + D+ + SN+ A V L
Sbjct: 107 DRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITI-SNILKNATAVKVELEP 165
Query: 236 LPLSVLKVLR-EPTIDPNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRCMIPDDMGLG 412
LP +++ + +P P+ ++ T ++ +L +L P+Q EGV F + R GR ++ D+MGLG
Sbjct: 166 LPQNIIGLTNFKPKAAPSDLN-TVMDPSLIERLFPYQKEGVIFALERDGRILLADEMGLG 224
Query: 413 KTFQALGIASYY 448
K+ QAL IA YY
Sbjct: 225 KSVQALTIARYY 236
>U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical
protein C16A3.1c protein.
Length = 690
Score = 72.9 bits (171), Expect = 1e-13
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +2
Query: 62 DRFEVNPSEFCAPLINIFKSILSKSYDSKTKLWNFSVDDYQDLMSNVA--TLAPHVVLGN 235
DR ++ F + +I++ K + S++YD + W + D+ + SN+ A V L
Sbjct: 110 DRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITI-SNILKNATAVKVELEP 168
Query: 236 LPLSVLKVLR-EPTIDPNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRCMIPDDMGLG 412
LP +++ + +P P+ ++ T ++ +L +L P+Q EGV F + R GR ++ D+MGLG
Sbjct: 169 LPQNIIGLTNFKPKAAPSDLN-TVMDPSLIERLFPYQKEGVIFALERDGRILLADEMGLG 227
Query: 413 KTFQALGIASYY 448
K+ QAL IA YY
Sbjct: 228 KSVQALTIARYY 239
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 281 PNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGR----CMIPDDMGLGKTFQALGI 436
P DLT + L +LMP Q G+R+ + R G+ ++ DDMGLGKT L +
Sbjct: 356 PAETDLTDTPDGLLVELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSL 411
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 30.3 bits (65), Expect = 0.68
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 248 VLKVLREPTID-PNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRC----MIPDDMGLG 412
V++ L E T P+ +LT + + +LMP Q G+ + R + ++ DDMGLG
Sbjct: 443 VVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLG 502
Query: 413 KTFQALGIASY 445
KT + + ++
Sbjct: 503 KTLSMISLIAH 513
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 30.3 bits (65), Expect = 0.68
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 248 VLKVLREPTID-PNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRC----MIPDDMGLG 412
V++ L E T P+ +LT + + +LMP Q G+ + R + ++ DDMGLG
Sbjct: 443 VVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLG 502
Query: 413 KTFQALGIASY 445
KT + + ++
Sbjct: 503 KTLSMISLIAH 513
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 30.3 bits (65), Expect = 0.68
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 326 KLMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
KL P+Q +G+ + ++ + + D+MGLGKT Q + +Y
Sbjct: 365 KLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITY 407
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.9 bits (64), Expect = 0.89
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 329 LMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
L P+Q +G+ + ++ + + D+MGLGKT Q + + +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.9 bits (64), Expect = 0.89
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 329 LMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
L P+Q +G+ + ++ + + D+MGLGKT Q + + +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 29.9 bits (64), Expect = 0.89
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 323 CKLMPFQYEGVRFGIARRGR---CMIPDDMGLGKTFQALGIASY 445
C L +Q GV++ I + ++ D+MGLGKT Q + SY
Sbjct: 392 CTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSY 435
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 29.9 bits (64), Expect = 0.89
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 323 CKLMPFQYEGVRFGIARRGR---CMIPDDMGLGKTFQALGIASY 445
C L +Q GV++ I + ++ D+MGLGKT Q + SY
Sbjct: 392 CTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSY 435
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 29.9 bits (64), Expect = 0.89
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 329 LMPFQYEGVRFGIARRGRCM---IPDDMGLGKTFQALGIASY 445
L P+Q +G+ + ++ + + D+MGLGKT Q + + +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical
protein C39B10.1 protein.
Length = 583
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +2
Query: 62 DRFEVNPSEFCAPLINIFKSILSKSYDSKTKLWNFSVDDYQDLMSNVATLAPHVVLGNLP 241
D +E+N P+ +++ YD K +++ F V + DL+ T P +V+G L
Sbjct: 192 DCYEINFDSNGLPMFRNH-TMMKPYYDDKIRIYRFLVHFFPDLLFRAPT--PIIVIGTLT 248
Query: 242 LSVLKVLREPTI 277
+ ++ + ++
Sbjct: 249 VKTIQACSQRSV 260
>AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical
protein Y60A3A.19b protein.
Length = 255
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 269 PTIDPNLIDLTPVEETLRCKLMPFQYEGVRFGIARRGRCMIPDDMGLGKTFQALGIASYY 448
P ++ IDLT + +RC L+P Y ++ I R PD G A I S Y
Sbjct: 87 PLLEELDIDLTDIYYKIRCVLLPLPYFRMKLNIVRES----PDFWGPLAVVLAFAILSLY 142
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 329 LMPFQYEGVRFGIA---RRGRCMIPDDMGLGKTFQALGIAS 442
L +Q+EGV + + C++ D+MGLGKT Q + S
Sbjct: 1187 LREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLS 1227
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 326 KLMPFQYEGVRFGI---ARRGRCMIPDDMGLGKTFQALGI 436
KL +Q EG+ + + + ++ D+MGLGKT Q++ +
Sbjct: 404 KLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISL 443
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 326 KLMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
KL P+Q EG+ R + ++ D+MGLGKT Q+L
Sbjct: 601 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSL 638
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 299 TPVEETLRCKLMPFQYEGVRFGIA---RRGRCMIPDDMGLGKTFQALGIASY 445
TPV +R +L +Q G+ + + + ++ D+MGLGKT Q + + ++
Sbjct: 548 TPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAH 599
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 299 TPVEETLRCKLMPFQYEGVRFGIA---RRGRCMIPDDMGLGKTFQALGIASY 445
TPV +R +L +Q G+ + + + ++ D+MGLGKT Q + + ++
Sbjct: 548 TPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAH 599
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Frame = +2
Query: 329 LMPFQYEGVRF--------GIARRGRCMIPDDMGLGKTFQALGI 436
L P Q +GV+F I C++ D+MGLGKT Q + +
Sbjct: 202 LRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISL 245
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Frame = +2
Query: 329 LMPFQYEGVRF--------GIARRGRCMIPDDMGLGKTFQALGI 436
L P Q +GV+F I C++ D+MGLGKT Q + +
Sbjct: 202 LRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISL 245
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 326 KLMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
KL P+Q EG+ R + ++ D+MGLGKT Q+L
Sbjct: 601 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSL 638
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 326 KLMPFQYEGVRF---GIARRGRCMIPDDMGLGKTFQAL 430
KL FQ EGV + R ++ D+MGLGKT Q++
Sbjct: 193 KLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSV 230
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.9 bits (59), Expect = 3.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 421 KRFTQSHVIWYHTSSATCYTKPD 353
K ++ SH++ ++ +SATC PD
Sbjct: 248 KHYSLSHLVMFYKTSATCEINPD 270
>U41019-5|ABN43092.1| 134|Caenorhabditis elegans Hypothetical
protein C04E7.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 92 CAPLINIFKSILSKSYDSKTKLWNFSVDDYQD 187
C P +I KSI++K + K++N S++ Y +
Sbjct: 43 CQPEEDIAKSIVAKMIEEHNKVYNLSIEFYTE 74
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 329 LMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
L P+Q EG+ R + ++ D+MGLGKT Q+L
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSL 652
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 329 LMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
L P+Q EG+ R + ++ D+MGLGKT Q+L
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSL 652
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 329 LMPFQYEGV---RFGIARRGRCMIPDDMGLGKTFQAL 430
L P+Q EG+ R + ++ D+MGLGKT Q+L
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSL 652
>Z81520-1|CAB04223.1| 399|Caenorhabditis elegans Hypothetical
protein F31B9.1 protein.
Length = 399
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 63 IDLR*ILQNFAHHSLTFSKVYYLKVTILKQNYGISLLTIIKI*CPM 200
ID +L NFA H L F + Y+L ++L Q I + + I PM
Sbjct: 122 IDRGWLLPNFACHLLRFLQEYFLYASVLLQ-MAIGVERFLAICSPM 166
>Z54271-4|CAA91034.1| 259|Caenorhabditis elegans Hypothetical
protein F21D5.4 protein.
Length = 259
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 330 SLQRNVSSTGVKSIKLGSIVGSLNTFNTDNGRFPKTTCGANVATLD 193
SL ++S K+I G++ G L FN +NG G N T +
Sbjct: 164 SLFELINSDEWKNISEGNVSGFLEDFNAENGETSLKVEGNNSTTTE 209
>Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical
protein D2013.8b protein.
Length = 425
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 INIFKS-ILSKSYDSKTKLWNFSVDDYQDLMSNV 202
I I+KS +++ S+D K+WN++ + Q +SNV
Sbjct: 222 IAIWKSQLITSSFDRSIKMWNWAENPEQIDISNV 255
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 INIFKS-ILSKSYDSKTKLWNFSVDDYQDLMSNV 202
I I+KS +++ S+D K+WN++ + Q +SNV
Sbjct: 884 IAIWKSQLITSSFDRSIKMWNWAENPEQIDISNV 917
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 386 MIPDDMGLGKTFQALGI 436
++ D+MGLGKT QAL +
Sbjct: 299 ILADEMGLGKTIQALSL 315
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 386 MIPDDMGLGKTFQALGI 436
++ D+MGLGKT QAL +
Sbjct: 299 ILADEMGLGKTIQALSL 315
>AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical
protein C52E2.5 protein.
Length = 591
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 86 EFCAPLINIFKSILSKSYDSKTKLWNFSVDDYQDLMSNVATL 211
E C +++ +S+L Y + TKL FSV D Q + +++A+L
Sbjct: 505 EACLQSVDVSRSVLP--YSNSTKLNKFSVPDVQSI-NDLASL 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,572,310
Number of Sequences: 27780
Number of extensions: 178765
Number of successful extensions: 639
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -