Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N14
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 205 4e-54
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 205 4e-54
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 3e-38
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 152 3e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 3e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 4e-20
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 1e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 4e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 1e-04
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 29 0.34
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 1.8
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 1.8
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 26 3.2
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 26 4.2
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 26 4.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 5.5
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 9.6
SPBC336.05c |||S-adenosylmethionine-dependentmethyltransferase|S... 25 9.6
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 9.6
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 205 bits (500), Expect = 4e-54
Identities = 98/128 (76%), Positives = 107/128 (83%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 277 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCAENDLSQVLCSSPSSCNQLQEDKCGHTNN 456
IQKESTLHLVLRLRGG IEPSL+ LA KYNC + + P ++ KCGHTN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQ 120
Query: 457 LRPKKKIK 480
LRPKKK+K
Sbjct: 121 LRPKKKLK 128
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 205 bits (500), Expect = 4e-54
Identities = 98/128 (76%), Positives = 107/128 (83%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 277 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCAENDLSQVLCSSPSSCNQLQEDKCGHTNN 456
IQKESTLHLVLRLRGG IEPSL+ LA KYNC + + P ++ KCGHTN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQ 120
Query: 457 LRPKKKIK 480
LRPKKK+K
Sbjct: 121 LRPKKKLK 128
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 3e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 277 IQKESTLHLVLRLRGG 324
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 92.3 bits (219), Expect = 4e-20
Identities = 40/77 (51%), Positives = 57/77 (74%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 277 IQKESTLHLVLRLRGGT 327
++ S LHLVL LRGG+
Sbjct: 61 LEGGSVLHLVLALRGGS 77
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 44.0 bits (99), Expect = 1e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES-TLHL 303
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++ + +
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQDFIVCM 71
Query: 304 VLRLRGGTIEP 336
V R + T P
Sbjct: 72 VSRPKTSTSTP 82
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 4e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 97 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 277 IQKESTLHLVLRL 315
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 124 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 297
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 29.5 bits (63), Expect = 0.34
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 94 TMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPPDQQRLIFAGKQLEDGRTLSD 270
T+ + ++ L+ + ++ EA + + +KI QDK + AGK+ ++ +
Sbjct: 47 TLDVLLQALSDASPEVQQEAVRCVAIISSKIPQDKLKSTVENLLSGVAGKKSKNYLSALS 106
Query: 271 YNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCAENDLSQVLC 399
+ + V + T+ PS + +YN A+ + +LC
Sbjct: 107 LLLSNSNVQPFVNKFYTSTVFPSFLQILKQYNVAQEEFFAILC 149
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 100 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 273
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 274 NIQKESTLHLVLRLRGGT 327
+ T HLV+ + T
Sbjct: 65 DATDLVTFHLVIAVFNST 82
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 212 INSDSSLPASNWKMAVHCLTTTFK 283
I LP+ +K A+HC TT F+
Sbjct: 137 IKQRMQLPSRKYKSALHCATTVFR 160
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 352 AMKYNCAENDLSQVLCSSPSSCNQLQEDK 438
A++ NC E + Q + + P+S N + +DK
Sbjct: 9 AIEENCPEEYVEQAIQNDPNSLNAVDDDK 37
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 436 CLPAIGCTRMETSIALATNHFLHSCTS*PRCEE 338
C+ I ++TS+ + T HF+ S T P E+
Sbjct: 193 CIERIHARPIQTSVRIDTTHFICSSTGGPEYEK 225
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 4.2
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Frame = +1
Query: 70 VARNGRSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA----- 234
+A +GR + + K TGKT + + + ++ K+KIQ +P + L +
Sbjct: 77 IALSGRDILAR--AKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKT 134
Query: 235 -GKQLE-------DGRTLSDYNIQKESTLHLVLRLRGGTIE 333
GK + G TL D I+ T+H+V+ G ++
Sbjct: 135 LGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 446 CPHLSSCNWLHEDGDEHSTCDKSFSAQL 363
CP+ SC +LHE GDE + K A L
Sbjct: 214 CPN-PSCMYLHEPGDEVDSYTKEDLASL 240
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 5.5
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 349 LAMKYN--CAEND-LSQVLCSSPSSCNQLQEDKCGHTNNLRPKKKIKD*FVDSL 501
L+ +YN C E D L + L + N+ +ED T+NL + K+ + VDSL
Sbjct: 611 LSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSL 664
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 507 MNERINKLILDLLLGTEVVCVSTLV 433
MNE IN L +L+ G +VC S +
Sbjct: 1134 MNEDINSLSSELIYGGNLVCGSKTI 1158
>SPBC336.05c |||S-adenosylmethionine-
dependentmethyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 306 NQVKGGLFLNVVVRQCTAIFQLLAGK 229
N +K F ++ R C +FQ++AGK
Sbjct: 280 NLLKKAFFDHLFGRHCLLLFQVIAGK 305
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 24.6 bits (51), Expect = 9.6
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +1
Query: 118 LTGKTITLEVEASDTIENVKAKIQDKEGIP---PDQQRLIFAGKQLEDGRTLSDYNIQKE 288
L G T EV T+ + + +G P P + I A +G TL+ YN
Sbjct: 94 LKGPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRSTIVAPSLYSEGSTLNHYNNGSH 153
Query: 289 STLH 300
LH
Sbjct: 154 QVLH 157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,530,823
Number of Sequences: 5004
Number of extensions: 54956
Number of successful extensions: 148
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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