Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_N07
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 211 2e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 204 3e-53
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 201 2e-52
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 201 2e-52
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 198 2e-51
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 197 5e-51
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 135 2e-32
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 135 2e-32
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 103 6e-23
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 103 6e-23
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 101 2e-22
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 101 2e-22
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 100 6e-22
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 98 3e-21
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 97 5e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 97 5e-21
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 97 9e-21
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 96 2e-20
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 96 2e-20
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 96 2e-20
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 96 2e-20
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 91 4e-19
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 78 5e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 78 5e-15
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 30 0.92
U80450-4|AAB37829.1| 926|Caenorhabditis elegans Hypothetical pr... 29 1.6
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 29 2.1
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 29 2.1
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 29 2.1
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 29 2.1
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 6.5
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 25 7.3
AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical... 27 8.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 211 bits (516), Expect = 2e-55
Identities = 93/100 (93%), Positives = 99/100 (99%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYVPRA L+DLEPGTMDSVR+G
Sbjct: 20 FWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 204 bits (498), Expect = 3e-53
Identities = 89/100 (89%), Positives = 96/100 (96%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 201 bits (491), Expect = 2e-52
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 201 bits (491), Expect = 2e-52
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 198 bits (483), Expect = 2e-51
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 197 bits (480), Expect = 5e-51
Identities = 85/100 (85%), Positives = 95/100 (95%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
PFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 135 bits (326), Expect = 2e-32
Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Frame = +2
Query: 194 MVNLTMDGLG-RMDCTFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 370
++N+ + G ++ FWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRA
Sbjct: 4 IINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRA 63
Query: 371 ILLDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
IL+DL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 64 ILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 135 bits (326), Expect = 2e-32
Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Frame = +2
Query: 194 MVNLTMDGLG-RMDCTFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 370
++N+ + G ++ FWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRA
Sbjct: 4 IINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRA 63
Query: 371 ILLDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 538
IL+DL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 64 ILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 103 bits (248), Expect = 6e-23
Identities = 41/98 (41%), Positives = 62/98 (63%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G D E ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGT 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 103 bits (248), Expect = 6e-23
Identities = 41/98 (41%), Positives = 62/98 (63%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G D E ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGT 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 101 bits (243), Expect = 2e-22
Identities = 41/98 (41%), Positives = 63/98 (64%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G S + E ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGT 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 101 bits (243), Expect = 2e-22
Identities = 41/98 (41%), Positives = 63/98 (64%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G S + E ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGT 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 101 bits (241), Expect = 4e-22
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G D+ +E N +++E GK+VPRAI +DLEP +D VR+
Sbjct: 21 WELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRT 80
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 81 GTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 100 bits (240), Expect = 6e-22
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
WE+ EHG+D G + + + + + +++E+ GK+VPRAI +DLEP +D +R+G
Sbjct: 25 WELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNG 84
Query: 419 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+G +F PD + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 85 VYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLD 123
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 98.3 bits (234), Expect = 3e-21
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G + + L ++ N +++E GK+VPRAI++DLEP +D +R+
Sbjct: 26 WELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRT 85
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 86 GTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMD 125
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.5 bits (232), Expect = 5e-21
Identities = 38/98 (38%), Positives = 61/98 (62%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G + + ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGN 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.5 bits (232), Expect = 5e-21
Identities = 38/98 (38%), Positives = 61/98 (62%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G + + ++++ G+YVPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGN 80
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 81 YKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 96.7 bits (230), Expect = 9e-21
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVR 412
WE+ EHGI P G YH + D + E IN ++ E +GGK+VPR + +DLEP +D VR
Sbjct: 27 WELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVR 85
Query: 413 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 86 TGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G D L + + +++E G++VPRA+++DLEP +D +R+
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRT 80
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G D L + + +++E G++VPRA+++DLEP +D +R+
Sbjct: 20 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRT 79
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 80 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 119
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G D L + + +++E G++VPRA+++DLEP +D +R+
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRT 80
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRS 415
WE+ EHGI P G D L + + +++E G++VPRA+++DLEP +D +R+
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRT 80
Query: 416 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = +2
Query: 260 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGPFGQ 430
EHGI P G YH + D + E IN ++ E +GGK+VPR + +DLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 431 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 98
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/98 (37%), Positives = 62/98 (63%)
Frame = +2
Query: 242 WEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSGP 421
WE+ EHGI P G + D + ++++ G++VPR+I +DLEP +D +R+G
Sbjct: 21 WELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGA 79
Query: 422 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 535
+ ++F P+ + G+ A NN+A+GHYT G E++D+ LD
Sbjct: 80 YKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+L+DLEP ++ +
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQS 81
Query: 419 P-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 538
P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 82 PNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = +2
Query: 239 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDLEPGTMDSVRSG 418
FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+L+DLEP ++ +
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQS 81
Query: 419 P-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 538
P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 82 PNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 30.3 bits (65), Expect = 0.92
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 103 NQISRAYSTFGPYYINSSKNVYGYWIIFLSNGKFNHGWTWTY 228
N + Y++F +Y N +KN Y Y SN N W W +
Sbjct: 575 NFFNNNYNSFNNWYTNKNKNYYPY-----SNSNNNKPWMWFF 611
>U80450-4|AAB37829.1| 926|Caenorhabditis elegans Hypothetical
protein M01E11.3 protein.
Length = 926
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 149 ILLKMSMDIG*SFYRMVNLTMDGLGRMDCTFWEIISDEHGI---DPTGAYHG-DSDLQLE 316
++L+ MD ++ TMD GR++C W + E I D Y+G + + +E
Sbjct: 609 VVLEEEMDHVDHDESIIECTMDHEGRLECERWGLRGRESNIIEDDKRNVYNGYNMNNNIE 668
Query: 317 RINVYYNEASG 349
R N Y + +G
Sbjct: 669 RDNKYDSSMNG 679
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 514 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVEKDGAGHVLA 350
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 349 SGGLIVINIDALKLQV-RIAVVCTGGV 272
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 514 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVEKDGAGHVLA 350
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 349 SGGLIVINIDALKLQV-RIAVVCTGGV 272
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 514 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVEKDGAGHVLA 350
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 349 SGGLIVINIDALKLQV-RIAVVCTGGV 272
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 514 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVEKDGAGHVLA 350
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 349 SGGLIVINIDALKLQV-RIAVVCTGGV 272
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 364 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 257
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 248 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILLDL 385
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 25.0 bits (52), Expect(2) = 7.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 359 VPRAILLDLE-PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 508
+P+++ L E G +RSGP I R V+G + GN K ++ G
Sbjct: 145 IPKSVKLSTEFSGKRYQLRSGPLYVIDRRTIKVYGFTFEGNKAPKTYFYAG 195
Score = 20.6 bits (41), Expect(2) = 7.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 260 EHGIDPTGAYHGDSD 304
E+GI P G++ D+D
Sbjct: 91 EYGITPLGSFPEDND 105
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 25.0 bits (52), Expect(2) = 7.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 359 VPRAILLDLE-PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 508
+P+++ L E G +RSGP I R V+G + GN K ++ G
Sbjct: 145 IPKSVKLSTEFSGKRYQLRSGPLYVIDRRTIKVYGFTFEGNKAPKTYFYAG 195
Score = 20.6 bits (41), Expect(2) = 7.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 260 EHGIDPTGAYHGDSD 304
E+GI P G++ D+D
Sbjct: 91 EYGITPLGSFPEDND 105
>AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical
protein C15F1.2 protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 186 KDYPISIDIFRRINIVWTKSGICTAYLI*NVT 91
++Y + ID FRR + +WTK T + N T
Sbjct: 552 EEYKVEIDAFRREHNLWTKQNSNTTLIKRNET 583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,216,582
Number of Sequences: 27780
Number of extensions: 263004
Number of successful extensions: 814
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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