Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M24
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 192 2e-49
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 192 2e-49
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 192 2e-49
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 190 7e-49
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 188 3e-48
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 62 2e-10
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 61 6e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 61 6e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 61 6e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 61 6e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 61 6e-10
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 60 2e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 57 1e-08
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 54 7e-08
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 3e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 3e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 6e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 6e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 4e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 4e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 4e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 9e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 41 9e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 41 9e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 9e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.001
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.002
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.002
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.002
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.004
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.004
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 39 0.004
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 39 0.004
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.006
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.006
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 37 0.014
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.025
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.025
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.033
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.043
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.043
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.043
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.043
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.043
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 33 0.17
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.17
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.23
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.23
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.23
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.23
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 33 0.23
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.40
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.93
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 30 1.2
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 1.2
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 30 1.2
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 29 2.1
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 28 6.6
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 192 bits (467), Expect = 2e-49
Identities = 108/208 (51%), Positives = 135/208 (64%), Gaps = 8/208 (3%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +YQG
Sbjct: 198 AFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQG 256
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTE
Sbjct: 257 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTE 316
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFV 528
MN ++V +KPLYVA+AQRKEDR+A L ++ P+ G GY+V
Sbjct: 317 MNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYV 376
Query: 529 PTIPPAQR-FYGPAQMPQIRPTPRWTAQ 609
QR F G QM +RP RW Q
Sbjct: 377 ANPMQQQRNFAGGQQM--VRPGGRWGMQ 402
Score = 87.0 bits (206), Expect = 1e-17
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 85 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 264
++VG+ Q +A+R +EL T Q N+YVKN D + E L K FA FG I
Sbjct: 130 VFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 179
Query: 265 TSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 438
TS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 180 TSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 239
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 192 bits (467), Expect = 2e-49
Identities = 108/208 (51%), Positives = 135/208 (64%), Gaps = 8/208 (3%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +YQG
Sbjct: 195 AFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQG 253
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTE
Sbjct: 254 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTE 313
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFV 528
MN ++V +KPLYVA+AQRKEDR+A L ++ P+ G GY+V
Sbjct: 314 MNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYV 373
Query: 529 PTIPPAQR-FYGPAQMPQIRPTPRWTAQ 609
QR F G QM +RP RW Q
Sbjct: 374 ANPMQQQRNFAGGQQM--VRPGGRWGMQ 399
Score = 103 bits (246), Expect = 1e-22
Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q N+
Sbjct: 104 FETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNV 152
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NG 369
YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV + +
Sbjct: 153 YVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDS 212
Query: 370 RIVGTK-PLYVALAQRKEDRKAHL 438
I GT L+V AQ+K +R A L
Sbjct: 213 TIEGTDLKLHVCRAQKKSERHAEL 236
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEM 363
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 364 NGRIVGTKPLYVALAQRKEDRKAHL 438
NG ++ K ++V Q + R L
Sbjct: 118 NGMLLAGKKVFVGKFQPRAQRNREL 142
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 192 bits (467), Expect = 2e-49
Identities = 108/208 (51%), Positives = 135/208 (64%), Gaps = 8/208 (3%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +YQG
Sbjct: 258 AFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQG 316
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTE
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTE 376
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFV 528
MN ++V +KPLYVA+AQRKEDR+A L ++ P+ G GY+V
Sbjct: 377 MNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYV 436
Query: 529 PTIPPAQR-FYGPAQMPQIRPTPRWTAQ 609
QR F G QM +RP RW Q
Sbjct: 437 ANPMQQQRNFAGGQQM--VRPGGRWGMQ 462
Score = 103 bits (246), Expect = 1e-22
Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q N+
Sbjct: 167 FETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNV 215
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NG 369
YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV + +
Sbjct: 216 YVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDS 275
Query: 370 RIVGTK-PLYVALAQRKEDRKAHL 438
I GT L+V AQ+K +R A L
Sbjct: 276 TIEGTDLKLHVCRAQKKSERHAEL 299
Score = 70.9 bits (166), Expect = 7e-13
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
F+ P AERA M+ E + GKP+ + +Q+ + R N+
Sbjct: 80 FQQPADAERA-MDTMNFEALHGKPMRIMWSQR----------------DPAMRRSGAGNI 122
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNG 369
++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG
Sbjct: 123 FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNG 182
Query: 370 RIVGTKPLYVALAQRKEDRKAHL 438
++ K ++V Q + R L
Sbjct: 183 MLLAGKKVFVGKFQPRAQRNREL 205
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 190 bits (463), Expect = 7e-49
Identities = 107/208 (51%), Positives = 134/208 (64%), Gaps = 8/208 (3%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +YQG
Sbjct: 258 AFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQG 316
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTE
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTE 376
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFV 528
MN ++V +KPLYVA+ QRKEDR+A L ++ P+ G GY+V
Sbjct: 377 MNSKMVCSKPLYVAIGQRKEDRRAQLASQYMQRVASMRMHGNVPGAAMYNPTQPGPGYYV 436
Query: 529 PTIPPAQR-FYGPAQMPQIRPTPRWTAQ 609
QR F G QM +RP RW Q
Sbjct: 437 ANPMQQQRNFAGGQQM--VRPGGRWGMQ 462
Score = 103 bits (247), Expect = 1e-22
Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q N+
Sbjct: 167 FETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNV 215
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NG 369
YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV + +
Sbjct: 216 YVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDS 275
Query: 370 RIVGTK-PLYVALAQRKEDRKAHL 438
I GT L+V AQ+K +R A L
Sbjct: 276 TIEGTDLKLHVCRAQKKSERHAEL 299
Score = 70.9 bits (166), Expect = 7e-13
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
F+ P AERA M+ E + GKP+ + +Q+ + R N+
Sbjct: 80 FQQPADAERA-MDTMNFEALHGKPMRIMWSQR----------------DPAMRRSGAGNI 122
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNG 369
++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG
Sbjct: 123 FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNG 182
Query: 370 RIVGTKPLYVALAQRKEDRKAHL 438
++ K ++V Q + R L
Sbjct: 183 MLLAGKKVFVGKFQPRAQRNREL 205
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 188 bits (458), Expect = 3e-48
Identities = 109/206 (52%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RYQG
Sbjct: 284 AFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQG 342
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AVT+
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTD 402
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLT-------XXXXXXXXXXXXXXXXXIFQPSSAGG 519
MN +++G KPLYVALAQRKEDR+A L ++QP G
Sbjct: 403 MNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQ-G 461
Query: 520 YFVPTIPPAQRFYG-PAQMPQIRPTP 594
YFVP AQ G Q QIR P
Sbjct: 462 YFVPNPMNAQGRPGFQPQSAQIRGPP 487
Score = 86.6 bits (205), Expect = 1e-17
Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E +Y N+
Sbjct: 192 FETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNV 240
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNG 369
+VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N
Sbjct: 241 FVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLND 300
Query: 370 RIV-GTK-PLYVALAQRKEDRKAHL 438
I+ GT L V AQ+K +R A L
Sbjct: 301 SILEGTDCKLSVCRAQKKSERSAEL 325
Score = 67.7 bits (158), Expect = 7e-12
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
F+ P AERA +N E++ G+P+ + +Q+ + R N+
Sbjct: 105 FQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNI 147
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNG 369
++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A A+ ++NG
Sbjct: 148 FIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Query: 370 RIVGTKPLYVALAQRKEDRKAHL 438
++ K +YV Q + R L
Sbjct: 208 MLLSDKKVYVGKFQPRAQRMKEL 230
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 188 bits (458), Expect = 3e-48
Identities = 109/206 (52%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
AF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RYQG
Sbjct: 284 AFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQG 342
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 360
VNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AVT+
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTD 402
Query: 361 MNGRIVGTKPLYVALAQRKEDRKAHLT-------XXXXXXXXXXXXXXXXXIFQPSSAGG 519
MN +++G KPLYVALAQRKEDR+A L ++QP G
Sbjct: 403 MNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQ-G 461
Query: 520 YFVPTIPPAQRFYG-PAQMPQIRPTP 594
YFVP AQ G Q QIR P
Sbjct: 462 YFVPNPMNAQGRPGFQPQSAQIRGPP 487
Score = 86.6 bits (205), Expect = 1e-17
Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E +Y N+
Sbjct: 192 FETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNV 240
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNG 369
+VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N
Sbjct: 241 FVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLND 300
Query: 370 RIV-GTK-PLYVALAQRKEDRKAHL 438
I+ GT L V AQ+K +R A L
Sbjct: 301 SILEGTDCKLSVCRAQKKSERSAEL 325
Score = 67.7 bits (158), Expect = 7e-12
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
F+ P AERA +N E++ G+P+ + +Q+ + R N+
Sbjct: 105 FQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNI 147
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNG 369
++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A A+ ++NG
Sbjct: 148 FIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Query: 370 RIVGTKPLYVALAQRKEDRKAHL 438
++ K +YV Q + R L
Sbjct: 208 MLLSDKKVYVGKFQPRAQRMKEL 230
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 361 MNGRIVGTKPLYVALAQRK 417
MNG+ +G + + A RK
Sbjct: 83 MNGQWLGRRTIRTNWATRK 101
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 DAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYV 198
+ AERA ++NG+ L + + A +K Q++ E+ E + G N +YV
Sbjct: 74 EEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 132
Query: 199 KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 378
N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + V
Sbjct: 133 GNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDV 187
Query: 379 G 381
G
Sbjct: 188 G 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 361 MNGRIVGTKPLYVALAQRK 417
MNG+ +G + + A RK
Sbjct: 93 MNGQWLGRRTIRTNWATRK 111
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 DAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYV 198
+ AERA ++NG+ L + + A +K Q++ E+ E + G N +YV
Sbjct: 84 EEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 142
Query: 199 KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 378
N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + V
Sbjct: 143 GNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDV 197
Query: 379 G 381
G
Sbjct: 198 G 198
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 361 MNGRIVGTKPLYVALAQRK 417
MNG+ +G + + A RK
Sbjct: 196 MNGQWLGRRTIRTNWATRK 214
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 DAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYV 198
+ AERA ++NG+ L + + A +K Q++ E+ E + G N +YV
Sbjct: 187 EEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 245
Query: 199 KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 378
N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + V
Sbjct: 246 GNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDV 300
Query: 379 G 381
G
Sbjct: 301 G 301
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
LYV NLD T+ ++ + F G++T KV+ DG + + FV FS +A++A+ MN
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF-DGSNDPYAFVEFSDHGQASQALQTMNK 106
Query: 370 RIV 378
R++
Sbjct: 107 RLL 109
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 361 MNGRIVGTKPLYVALAQRK 417
MNG+ +G + + A RK
Sbjct: 164 MNGQWLGRRTIRTNWATRK 182
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 DAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYV 198
+ AERA ++NG+ L + + A +K Q++ E+ E + G N +YV
Sbjct: 155 EEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 213
Query: 199 KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 378
N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + V
Sbjct: 214 GNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDV 268
Query: 379 G 381
G
Sbjct: 269 G 269
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 291
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 62.5 bits (145), Expect = 2e-10
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Frame = +1
Query: 13 FEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNL 192
F D + A A NG+EL+E K ++V A + E + + K E + ++
Sbjct: 85 FSDHNQATLALQSHNGRELLE-KEMHVTWAFEPREPGEN------RSKPETSRHF---HV 134
Query: 193 YVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMN 366
+V +L ID +LR+ F FG ++ AK++ ++ + KG+GFV + E+A +A+ EMN
Sbjct: 135 FVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMN 194
Query: 367 GRIVGTKPLYVALAQRKED 423
G +G + + A RK D
Sbjct: 195 GAWLGRRTIRTNWATRKPD 213
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V NLD I DE L F G + AK++ E G + + FV FS +AT A+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE-GLNDPYAFVEFSDHNQATLALQSHNG 100
Query: 370 RIVGTKPLYVALA 408
R + K ++V A
Sbjct: 101 RELLEKEMHVTWA 113
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 355 TEMNGRIVGTKPLYVAL 405
+ MNG +G+K L V L
Sbjct: 394 SAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 355 TEMNGRIVGTKPLYVAL 405
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 364 -NGRIVG-TKPLYVALAQRKEDR 426
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 355 TEMNGRIVGTKPLYVAL 405
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 364 -NGRIVG-TKPLYVALAQRKEDR 426
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 355 TEMNGRIVGTKPLYVAL 405
+ MNG +G+K L V L
Sbjct: 487 SAMNGFQIGSKRLKVQL 503
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 364 -NGRIVG-TKPLYVALAQRKEDR 426
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 355 TEMNGRIVGTKPLYVAL 405
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 364 -NGRIVG-TKPLYVALAQRKEDR 426
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 100 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 279
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 280 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 426
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 100 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 279
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 280 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 426
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKA 351
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E + A
Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
Query: 352 VTEMNGRIVGTKPLYVALAQRKEDR 426
+ MNG+ + + + V+ A +++ +
Sbjct: 159 LEAMNGQFLCNRAITVSYAFKRDSK 183
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 172 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 345
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 346 KAVTEMNGRIVGTKPLYVALAQRKE 420
A+ +N + KP+ V A E
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHE 93
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKA 351
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E + A
Sbjct: 109 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 168
Query: 352 VTEMNGRIVGTKPLYVALAQRKEDR 426
+ MNG+ + + + V+ A +++ +
Sbjct: 169 LEAMNGQFLCNRAITVSYAFKRDSK 193
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 172 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 345
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 346 KAVTEMNGRIVGTKPLYVALAQRKE 420
A+ +N + KP+ V A E
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHE 103
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = +1
Query: 163 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPE 336
R+ + +++V +L + +E L+ F FG ++ AKV+ ++ +SKG+GFV F + +
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Query: 337 EATKAVTEMNGRIVGTKPLYVALAQRK--EDRKAHLT 441
A A+ MNG+ +G + + A RK E+ + LT
Sbjct: 188 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%)
Frame = +1
Query: 10 AFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN 189
+F + AE A +NGK + + A+K +E ++ K FEQ+ + T+ +
Sbjct: 182 SFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS--TKADNTS 238
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
+YV N+ D LR F+ +G I ++ +++ + FV + E ATKA+ EMNG
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIF----KTQRYAFVRYEKKECATKAIMEMNG 294
Query: 370 R 372
+
Sbjct: 295 K 295
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 363
++ +L + + DE L K F + + AKV+ E +SKG+GFV F E+ +A+ EM
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 364 NGRIVGTKPLYVALAQRKE 420
+G+ VG +P+ + + KE
Sbjct: 265 DGKYVGNRPIKLRKSAWKE 283
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 342
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 76 TPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 135
Query: 343 TKAVTEMNGRIVGTKPLYVALAQRKED 423
AV +N G + L Q+++D
Sbjct: 136 AAAVDGLNTE--GVQAQMAKLQQQEQD 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 363
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+ ++ +
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 222
Query: 364 NG 369
NG
Sbjct: 223 NG 224
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 342
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 343 TKAVTEMNGRIVGTKPLYVALAQRKED 423
AV +N G + L Q+++D
Sbjct: 162 AAAVDGLNTE--GVQAQMAKLQQQEQD 186
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 363
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+ ++ +
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 248
Query: 364 NG 369
NG
Sbjct: 249 NG 250
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKA 351
+G NLYV + ++ L F PFG I +++++ ++ G SKG GFV F +EA A
Sbjct: 126 KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
Query: 352 VTEMNGRI 375
+ +NG I
Sbjct: 186 IKTLNGSI 193
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE 360
NL + L + E +R F G I S K++ + G+S G+GFV + E+A +AV+
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 361 MNGRIVGTKPLYVALAQRKEDR 426
NG + K + V+ A+ D+
Sbjct: 103 FNGLRLQNKTIKVSYARPSNDQ 124
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVT 357
G L+V NL DD L + F+ FG I + K++ + + KG+ FV S+ EA A+
Sbjct: 373 GYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAML 432
Query: 358 EMNGRIVGTKPLYV 399
+NG + K L V
Sbjct: 433 SLNGTNLAGKTLQV 446
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 109 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 288
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 289 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 399
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 109 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 288
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 289 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 399
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 109 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 288
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 289 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 399
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 370 RIVGTKPLYVALAQRKEDRK 429
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 370 RIVGTKPLYVALAQRKEDRK 429
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 370 RIVGTKPLYVALA-QRKEDRKA 432
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 370 RIVGTKPLYVALA-QRKEDRKA 432
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTE 360
++YV N +E L F+ G I + +++ E GR +GF F+ F+ A +AV +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 361 MNGRIVGTKPLYVALAQR 414
MNG +PL V LA +
Sbjct: 66 MNGAEFNGRPLRVNLANK 83
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 169 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK-VMLEDGRSKGFGFVCFSSPEEAT 345
T + ++V+N+ D+ L+ F+ FGT+TS + V +DG+ KG FV F + A
Sbjct: 678 TTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQ 737
Query: 346 KAVTEMNGRIVGTKPLYVALA 408
K V + ++ + L VAL+
Sbjct: 738 KCVASGDKLMLRERELEVALS 758
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
++V NLD T ++ +R+ +I A+ D +GF +V + ++A +A+ +
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKDRV 654
Query: 370 RIVGTKPLYVA 402
+ G +P++++
Sbjct: 655 PVKG-RPMFIS 664
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 366
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F A+ A+ + N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSN 64
Query: 367 GRIVGTKPLYV 399
+K L V
Sbjct: 65 QTFFNSKKLTV 75
Score = 37.9 bits (84), Expect = 0.006
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +1
Query: 31 AERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLD 210
A+ A ++ G EL++G L + + ++ + LKRK + K + + L V+NL
Sbjct: 702 AKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQG----ECTKLLVRNLP 756
Query: 211 DTIDDERLRKEFAPFGTITSAKVMLEDGRS---KGFGFVCFSSPEEATKA 351
+ + F FG + + ++ + G+ +GFGFV F S +EA +A
Sbjct: 757 FEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 363
L+++NL ++ L+ F +G ++ +V+++ G KGF V F PE A A + +
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 364 NGRIVGTKPLYVALAQRKEDRK 429
+G + + +++ K ++
Sbjct: 341 DGYVFKGRMMHILPGDEKRTKE 362
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L F PFG + + + + E G+ +GFGFV F E+A A+ M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 364 NGRIVGTKPLYVALAQ 411
N + K + V A+
Sbjct: 73 NESELFGKTIRVNFAR 88
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 178 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKA 351
QG ++YV N+ +E + FA G + + +++ E GR +GF FV FS A +A
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 352 VTEMNGRIVGTKPLYVALAQR 414
V ++NG + L V A +
Sbjct: 64 VEQLNGVAFNGRNLRVNYANK 84
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 244 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 420
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 61
Query: 421 DRKA 432
++KA
Sbjct: 62 NKKA 65
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAV 354
G ++YV N ++ L F+ G +++ +++ E GR +GF FV F+ A +AV
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAV 62
Query: 355 TEMNGRIVGTKPLYVALAQRKED 423
+ NG + L V LAQ + +
Sbjct: 63 DQFNGVDFNGRALRVNLAQNRNN 85
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = +1
Query: 115 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--E 288
E K+ K QLK++ +G ++++NL +E +++E + FG I A + +
Sbjct: 241 EPAKKPKNPKAQLKTDESIT-EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKD 299
Query: 289 DGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTKPLYVALA-QRKE 420
G SKG FV FS+P EA+ + + +G I+ + + LA RKE
Sbjct: 300 SGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDNRLVKANLAIPRKE 345
Score = 31.1 bits (67), Expect = 0.70
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +1
Query: 109 KAERQKELKRKFEQLKSERLTRY-QGVNLYVKNLDDTIDDERLR----KEFAPFGTITSA 273
K ER E RK K E + V L + NL I+D +L+ K +P IT
Sbjct: 389 KRERIAEAMRK----KLENTNMFISPVRLCIHNLPQKINDVKLKELAQKFTSPGALITEC 444
Query: 274 KVMLE------DGRSK--GFGFVCFSSPEEATKAVTEMN 366
+V ++ DG+ K GFGFV F A + + ++N
Sbjct: 445 RVWMDKKRLTPDGKPKSSGFGFVAFKEHMHALECLKKLN 483
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 363
NL+V ++ D + D L + F + + AK+ DG SKG GFV F + + A+ EM
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 364 NGRIVGTKPLYVALAQRKEDR 426
+ VG + + LA + +R
Sbjct: 217 HRTKVGGCRIILKLAGSRGER 237
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 364 -NGRIVG-TKPLYVALAQRKEDR 426
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 178 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAV 354
Q V+L V +D DE +K F GT+ ++ + DG SKGFGFV SS E K +
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL 230
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 351
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 363
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 364 NGRIVGTKPLYVALAQRKEDRK 429
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 363
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 364 NGRIVGTKPLYVALAQRKEDRK 429
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 351
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 366
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTE 360
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F + A A+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 361 MNG 369
+NG
Sbjct: 79 LNG 81
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 366
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 367 GRIVGTKPLYVALAQRKEDR 426
G +G K L V LA + R
Sbjct: 353 GMQLGDKQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 366
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 367 GRIVGTKPLYVALAQRKEDR 426
G +G K L V LA + R
Sbjct: 353 GMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 366
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 367 GRIVGTKPLYVALAQRKEDR 426
G +G K L V LA + R
Sbjct: 328 GMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 366
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 367 GRIVGTKPLYVALAQRKEDR 426
G +G K L V LA + R
Sbjct: 331 GMQLGDKQLVVQLACANQQR 350
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 360
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 361 MNGRIVGTKPLYVALAQ 411
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 360
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 361 MNGRIVGTKPLYVALAQ 411
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 364 NGRIVG 381
+ + G
Sbjct: 176 SHMVNG 181
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 364 NGRIVG 381
+ + G
Sbjct: 138 SHMVNG 143
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 232 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 364 NGRIVG 381
+ + G
Sbjct: 138 SHMVNG 143
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 232 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 364 NGRIVG 381
+ + G
Sbjct: 176 SHMVNG 181
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 360
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 363
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 364 NGRIVG 381
+ + G
Sbjct: 176 SHMVNG 181
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 196 VKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 366
V NL ++++ LR F G + + + G KGF FV F S ++A +A+ E+N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
+++ L T E +++ F +G + A +M + R +GFGFV F S E A K V E+
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEI 194
Query: 364 NGRIVGTKPLYVALAQRKE 420
+ + K + AQ KE
Sbjct: 195 HFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 364 NGRIVGTK 387
+ G K
Sbjct: 107 EHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
+++ L T E +++ F +G + A +M + R +GFGFV F S E A K V E+
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEI 194
Query: 364 NGRIVGTKPLYVALAQRKE 420
+ + K + AQ KE
Sbjct: 195 HFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 364 NGRIVGTK 387
+ G K
Sbjct: 107 EHELDGKK 114
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKA 351
L V NL ++ LR F FG I ++ + G S+GFGF+ F+ E+AT A
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 366
+++ NL + ++L + F G IT ++ +G+SKG + ++ P EA +AV+ +N
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLN 249
Query: 367 GRIVGTKPLYVAL 405
G+ + + L V +
Sbjct: 250 GQRLFDRNLVVKM 262
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFG 312
G NL++ +L D L FAPFG I SAKV ++ SK FG
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 187 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 366
N++V+ + + D L + FG IT V + G+GFV F + A K + EM+
Sbjct: 97 NVFVRGISRDMPDTEL---YQAFGGITDGVVQCHV--ADGYGFVLFDTRANAQKKIVEMD 151
Query: 367 GRIVGTKPLYVALAQ 411
G+ + K + V+ A+
Sbjct: 152 GKTLNGKLISVSWAR 166
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 115 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 291
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 292 -GRSKGFGFVCFSSPEEATKAVTEMNG 369
G+SKGF F+C+ AV NG
Sbjct: 75 TGKSKGFAFLCYKDQRSTILAVDNFNG 101
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 342
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 110
Query: 364 NGRIVG 381
++ G
Sbjct: 111 PHKLGG 116
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 226 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 399
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 162 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 217
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 130
Query: 364 NGRIVG 381
++ G
Sbjct: 131 PHKLGG 136
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 226 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 399
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 182 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 237
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 131
Query: 364 NGRIVG 381
++ G
Sbjct: 132 PHKLGG 137
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 226 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 399
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 183 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 238
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 342
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 286 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 420
+ G KGF +V F + ++ A++ +NG G + L V AQ+++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 363
++V L D+ L + F FG I A V+ + +S+G+GFV A +A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 364 NGRIVGTK 387
N I G K
Sbjct: 97 NPIIDGRK 104
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
LY+KNL I E + + F FG + +V ++G FV + +A A ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG-NTAETRGTAFVVYEDIFDAKTACEHLSG 79
Query: 370 RIVGTKPLYVALAQ 411
V + L V Q
Sbjct: 80 YNVSNRYLVVLYYQ 93
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 370 RIVG 381
+ +G
Sbjct: 59 KELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 370 RIVG 381
+ +G
Sbjct: 59 KELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 370 RIVG 381
+ +G
Sbjct: 59 KELG 62
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKE----FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 357
LY+ NL++ I + LRK F FG I S + + +G V F A+ A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSV-MCFRTLKMRGQAHVIFKELPAASAARE 68
Query: 358 EMNGRIVGTKPLYVALAQRKED 423
+NG KP+ + A+ D
Sbjct: 69 ALNGFPFYEKPMRIQFAREDSD 90
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 370 RIVGTKPLYVALA 408
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 369
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 370 RIVGTKPLYVALA 408
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Frame = +1
Query: 97 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 252
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 253 FGTI------TSAKVML---EDGRSKGFGFVCFSSPEEATKAVTEMNG 369
G I K L E+G+ KG G C+ E A ++G
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDG 249
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 363
V +Y+ L + D + F +G ++ V++++G FGFV F +A AV ++
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKNG----FGFVDFQDQRDADDAVHDL 55
Query: 364 NGRIVGTKPLYVALAQRK 417
NG+ + + + + +RK
Sbjct: 56 NGKELCGERVILEFPRRK 73
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 291
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 3/137 (2%)
Frame = +1
Query: 4 RGAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 183
RGA D D R + P R + RQ+ +R + +
Sbjct: 75 RGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQR--RRASPRRSPAARSASPA 132
Query: 184 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV---MLEDGRSKGFGFVCFSSPEEATKAV 354
+ +KNL + L + F+ +G I + + + +G+G+V + + E+A K++
Sbjct: 133 KRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSI 192
Query: 355 TEMNGRIVGTKPLYVAL 405
M+G + ++V +
Sbjct: 193 KHMDGGQIDGMAVHVEM 209
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKG--FGFVCFSSPEEATKAVTEM 363
+YV N + +D+E L + F G + KV+L D R F V F A+ M
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKFALVEFEDELSVLFAIELM 72
Query: 364 NG 369
NG
Sbjct: 73 NG 74
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 34 ERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 150
E A +E +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 441 SQMGFA-VFLALS*SNIKRFCSNNTSIHFS 355
SQ+GF V+ N++ F +NNTSIH S
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNNTSIHLS 180
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 354
G +Y+ ++ +L F +G+I S + + G +GF + F S + A KA+
Sbjct: 24 GQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAI 83
Query: 355 TE----MNGRIVGTKPLYVALAQRKE 420
+ ++G V +P +++ K+
Sbjct: 84 EQRPHVIDGDRVDVEPYIPLISKNKK 109
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 25 DAAERACMELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 198
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 199 KNLDDTIDDER 231
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 399 NIKRFCSNNTSIHFSNRFCGFFRR*KTYESKTFAATILQHDLSRSNS 259
NI R+C + + F + G RR T E+ A +L H+L + NS
Sbjct: 170 NIIRYCVISQCLVFRDIHVGVRRRFPTLEAVAQAGIMLPHELEKFNS 216
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 97 RAQKKAERQKEL-KRKFEQLKSERLTR 174
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical
protein Y59C2A.2 protein.
Length = 440
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 562 PAQMPQIRPTPRWTAQAPVRPSTHT 636
P PQ P PR AQ P P HT
Sbjct: 35 PENPPQNAPNPRGNAQNPPNPPPHT 59
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 190 LYVKNLDDTIDDERLRKEFAPF-GTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 366
+++KN+ I ++ +K G + S KV + +V F +PE+A KA+ ++
Sbjct: 29 IHIKNIPTFIGFKQFKKVLEKILGDVKSKKVR----HMSDYAYVTFETPEDAQKAINLVD 84
Query: 367 G 369
G
Sbjct: 85 G 85
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 139 KFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRSKGFGF 315
+F++ + L YQG+ L +LD+ + K T A + + D R FG
Sbjct: 351 RFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELLMKTGATEEKILDTRVSIFGC 410
Query: 316 VCFSSPEEATKAVTEMNGRIV 378
+C + E+NG+I+
Sbjct: 411 MCKLDFTDLEPMFNELNGKIL 431
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 526 VPTIPPAQRFYGPAQMPQIRPTPRWTAQAPVRPSTHTPAS 645
VP + A Q+ Q++PT T Q+PV ST PAS
Sbjct: 143 VPLLQAASHIPSMLQLCQLQPT---TIQSPVYASTQQPAS 179
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 181 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 279
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 103 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 243
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,111
Number of Sequences: 27780
Number of extensions: 316710
Number of successful extensions: 1371
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -