Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_M24
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   2.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.8  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 518 PPALLGWNI 492
           PP LLGWN+
Sbjct: 17  PPRLLGWNV 25



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 154 LIAQIFVLILFDALLFSGLV 95
           L+A +++L  F ALL +GLV
Sbjct: 50  LLALLYILFTFLALLGNGLV 69


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = -2

Query: 634 YECLVLQVLGQSIGV*VVFAAFVLDHKSVVQEVWWEQSILLHYLVGISDPFVAYA 470
           Y C  +  L + + V  V    + DH+ V+  V  E S ++H     S   V  A
Sbjct: 207 YRCRTMHRLTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVA 261


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = -2

Query: 634 YECLVLQVLGQSIGV*VVFAAFVLDHKSVVQEVWWEQSILLHYLVGISDPFVAYA 470
           Y C  +  L + + V  V    + DH+ V+  V  E S ++H     S   V  A
Sbjct: 207 YRCRTMHRLTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVA 261


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 629 VLGLTGAWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 513
           V GL G  + H GVGR  G      K  A G++   + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 629 VLGLTGAWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 513
           V GL G  + H GVGR  G      K  A G++   + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 629 VLGLTGAWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 513
           V GL G  + H GVGR  G      K  A G++   + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 537 TSCTTLLWSSTNAANT 584
           T CTT  WS    A T
Sbjct: 199 TCCTTXWWSXXTVAXT 214


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 130 ILFDALLFSGLVQHTRVFL 74
           +LF  L F+GL  HT ++L
Sbjct: 247 MLFRKLPFAGLHSHTIIYL 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,695
Number of Sequences: 438
Number of extensions: 3929
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)