Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M21
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 130 7e-31
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 130 1e-30
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 130 1e-30
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 129 1e-30
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 129 1e-30
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 126 9e-30
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 125 3e-29
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 125 3e-29
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 114 5e-26
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 60 1e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 58 5e-09
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 53 1e-07
12_02_1282 + 27528159-27529148,27529549-27529614 53 2e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 1e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 1e-04
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 43 2e-04
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 34 0.087
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.81
03_02_0209 + 6423962-6424159,6424360-6424569 30 1.1
04_01_0208 + 2596110-2596928 29 1.9
11_01_0274 - 2050667-2052115 27 7.5
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 130 bits (314), Expect = 7e-31
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVH
Sbjct: 311 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVH 370
Query: 369 RKCF 358
RKCF
Sbjct: 371 RKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 130 bits (313), Expect = 1e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVH 373
Query: 369 RKCF 358
RKCF
Sbjct: 374 RKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 130 bits (313), Expect = 1e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVH 373
Query: 369 RKCF 358
RKCF
Sbjct: 374 RKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 129 bits (312), Expect = 1e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVH
Sbjct: 317 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVH 376
Query: 369 RKCF 358
RKCF
Sbjct: 377 RKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 129 bits (312), Expect = 1e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 373
Query: 369 RKCF 358
RKCF
Sbjct: 374 RKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 126 bits (305), Expect = 9e-30
Identities = 56/64 (87%), Positives = 62/64 (96%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVH 373
Query: 369 RKCF 358
RKCF
Sbjct: 374 RKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 125 bits (301), Expect = 3e-29
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 313 RMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVH 372
Query: 369 RKCF 358
KCF
Sbjct: 373 MKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 125 bits (301), Expect = 3e-29
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 313 RMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVH 372
Query: 369 RKCF 358
KCF
Sbjct: 373 MKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 114 bits (274), Expect = 5e-26
Identities = 58/78 (74%), Positives = 62/78 (79%), Gaps = 14/78 (17%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWI 412
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWI
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWI 373
Query: 411 SKQEYDESGPSIVHRKCF 358
SK EYDESGP+IVHRKCF
Sbjct: 374 SKGEYDESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDES 388
R Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++K +YDE+
Sbjct: 330 RFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDET 388
Query: 387 GPSIVHRKCF 358
GPSIVH+KCF
Sbjct: 389 GPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 400
R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 417 RLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
R++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G
Sbjct: 365 RLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCR 424
Query: 369 RKCF 358
R+ F
Sbjct: 425 RRFF 428
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/64 (53%), Positives = 36/64 (56%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
RM KEITALAPS+MKIK MWI+K EYDESGPSIVH
Sbjct: 314 RMSKEITALAPSSMKIK--------------------------MWIAKAEYDESGPSIVH 347
Query: 369 RKCF 358
RKCF
Sbjct: 348 RKCF 351
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -3
Query: 510 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 376
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 510 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 376
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Frame = -3
Query: 549 RMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE---- 391
R++KE+ L P+ + I++I PP S W G +++++STF + W I K+++ +
Sbjct: 416 RLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRR 475
Query: 390 SGPSIVH 370
+GPS V+
Sbjct: 476 NGPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 33.9 bits (74), Expect = 0.087
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -3
Query: 549 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 370
R++ I P +K++ + W G + A+ S F + S +Y E G ++ H
Sbjct: 641 RLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFH 700
Query: 369 RK 364
RK
Sbjct: 701 RK 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 0.81
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3
Query: 510 MKIKIIAPPERKYSVWIGGSILASL 436
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>03_02_0209 + 6423962-6424159,6424360-6424569
Length = 135
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 395 TSPAPRLCTGSASKRC--AHRCLQQPAVRSISRPAAQLR 285
T+PAP L A +RC A R +PA R+ RP LR
Sbjct: 32 TAPAPALPRAPARRRCQMARRRKARPAARARRRPVLDLR 70
>04_01_0208 + 2596110-2596928
Length = 272
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 331 WRQRCAQRLEALPVHNRGAGLVIFLFRDPHLLEGREGGEDRSTD 462
WR+R +R PVH RG +R P E EGG +R+ D
Sbjct: 177 WRRRWRRRRRDRPVHGRGG---TGGWRRPAAWEREEGGGERARD 217
>11_01_0274 - 2050667-2052115
Length = 482
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 125 SSFMRLQTILWRVQYRGRAVKCAPCGAALTPAVTI 229
+SF L I+ ++ RGR V C C A+ P + +
Sbjct: 110 TSFESLSAIVSQLAARGRPVTCIVCTMAMPPVLDV 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,325,436
Number of Sequences: 37544
Number of extensions: 280364
Number of successful extensions: 832
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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