Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M20
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 231 5e-62
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 228 4e-61
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 221 9e-59
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 31 0.14
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 29 0.73
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 0.96
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 27 1.7
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.7
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 2.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.2
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 3.9
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.1
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 6.8
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 25 6.8
SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein S17|S... 25 6.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 231 bits (566), Expect = 5e-62
Identities = 104/182 (57%), Positives = 138/182 (75%)
Frame = +2
Query: 14 RRLQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLA 193
+R+ ++++A KKR+ I KRAE Y EYR ER++I L R+AR GNYYVP E KL
Sbjct: 33 QRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLV 92
Query: 194 FVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSV 373
FVIRIRG+N + PK RK++QL RL QINNGVFV+ NKAT ML++ EPY+ +G PNLK+V
Sbjct: 93 FVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTV 152
Query: 374 RELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWP 553
REL+YKRGF K+N +R+ ++ N++IE L K +I+ +EDLIHEI+TVG FK A+NF+WP
Sbjct: 153 RELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWP 212
Query: 554 IQ 559
Q
Sbjct: 213 FQ 214
Score = 31.9 bits (69), Expect = 0.078
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 562 LNNPTGGWR-KKTIHYVDGGDFG 627
L++P GGWR +K H+++GGD G
Sbjct: 215 LSSPLGGWRDRKFKHFIEGGDAG 237
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 228 bits (558), Expect = 4e-61
Identities = 102/175 (58%), Positives = 135/175 (77%)
Frame = +2
Query: 35 KRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 214
+++SA KKR+ I KRAE Y EYR ER++I LAR+AR GNY+VP E KL FV+RIRG
Sbjct: 39 EKKSARQKKRELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRG 98
Query: 215 VNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKR 394
+N + PK RK++QL RL QINNG+FV+ NKA ML++ EPY+ +G PN K+VREL+YKR
Sbjct: 99 INNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKR 158
Query: 395 GFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWPIQ 559
GF K+N +R+P++ N++IE L K +I+ VEDLIHEI+TVG FK A+NFLWP +
Sbjct: 159 GFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFK 213
Score = 31.9 bits (69), Expect = 0.078
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 562 LNNPTGGWR-KKTIHYVDGGDFG 627
L++P GGWR +K H+++GGD G
Sbjct: 214 LSSPLGGWRERKFKHFIEGGDAG 236
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 221 bits (539), Expect = 9e-59
Identities = 99/179 (55%), Positives = 132/179 (73%)
Frame = +2
Query: 17 RLQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAF 196
R++ + ++ A K RKE FKRAE ++ YR +ER+ IRL R A+N+G+ +VP E KL F
Sbjct: 32 RVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLF 91
Query: 197 VIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 376
VIRI GV + PK+RKVL+L RL +INN VFVR NKA MLRI EPY+ +G PNL SVR
Sbjct: 92 VIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVR 151
Query: 377 ELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWP 553
EL+YKRGF K+NG+R+ ++ N+LIE+ L K ++I +ED+IHEI+ VG FK + FLWP
Sbjct: 152 ELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWP 210
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 31.1 bits (67), Expect = 0.14
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 441 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
HSS + L+N+ SSAL+++ + S +SSS+Q +S
Sbjct: 90 HSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSS 124
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 28.7 bits (61), Expect = 0.73
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 50 SIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGN 163
S+K+ +EI ++ E+ +R+K ++ ++ + A N GN
Sbjct: 152 SLKRNREIIEKEERSSFHFRVKPKNLDKVPKLAENEGN 189
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 0.96
Identities = 29/100 (29%), Positives = 48/100 (48%)
Frame = +3
Query: 246 YCSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVS 425
Y + +G +++T + S VS+ + S SP T T S S +++ S + + S S
Sbjct: 116 YLTGNGVLQTTVSSSSVSSTTSSSS--SSSPSSSSTTTTTSPSSSSSSSSSSSS-SSSSS 172
Query: 426 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
S + SS ++ +SS+ SS S SSS +TS
Sbjct: 173 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITS 212
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 372 SESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
S S +++ S + S + +HSS ++ +SS+ R SS ++ SSST +++
Sbjct: 195 SSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFIST 252
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 27.5 bits (58), Expect = 1.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 359 NLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLS--KQNIICVEDLIHEIFTVGEKFKY 532
N KSV + G L G ++ I+ + ++ R+ KQ ++ +E L H++ + K+
Sbjct: 143 NAKSVERIAEVSGNYALAGAQI-ISPSDCMDGRVKAIKQKLVELE-LSHKVCVISYSAKF 200
Query: 533 ASNFLWPIQ 559
AS F P +
Sbjct: 201 ASGFFGPFR 209
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 146 ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 265
+ N+G YY G +AFV I GV + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 356 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 478
P LK+ REL+ K+ + V SN ++EK L +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.2
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +3
Query: 267 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 425
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 460 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 517
Query: 426 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
+ P++++ L + S+ +SS + +SST +TS
Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTS 557
Score = 25.4 bits (53), Expect = 6.8
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +3
Query: 267 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 425
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 346 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 403
Query: 426 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
+ P++++ L + S+ +SS + +SST ++S
Sbjct: 404 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSS 443
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 80 RAEQYVKEYRIKERDEIRLARQARNRGNYYVPGE 181
+A Q ++ + +RL N+ N+++PGE
Sbjct: 309 KATQMTVDFLVDWAKSVRLCANRFNKSNFFIPGE 342
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.1
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +3
Query: 252 SCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRS 431
S S + S+++ S+ S S L ++ T S S+ T+ VS + S S S
Sbjct: 36 SSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
Query: 432 PP-THSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 545
T SS L + +S++ SS + LS SSS +S
Sbjct: 96 ASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASS 134
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.1
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +3
Query: 267 VRSTTACSFVSTRPQ*TC--FVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPT 440
V ST++ +F S P T ++S S ++ ++ S S T++ + S S P T
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSS-----SLSTSSIPST 243
Query: 441 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGPFKLEQP 572
SS ++ TSS+L SS S SSS+ + S P
Sbjct: 244 SSS----SSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSP 283
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -1
Query: 531 YLNFSPTVNISWMRSSTQMMFCLLSLFSMSELEVIGT 421
Y++ PT+++ ++ S+ +FCL L S++ LE++ T
Sbjct: 253 YVHEYPTLDLIYIFSALMSVFCL--LLSVASLELLHT 287
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 141 LANLISSRSLMRYSLTYCSALLKISFLFL-MEAERLLSVI 25
+ +L+S +SL T+C+++L +SF L + A+ LS +
Sbjct: 261 VVHLLSQKSLPYSLTTFCASILVLSFFQLPLFADHFLSAL 300
>SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 132
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 41 RSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARN 154
R S K ++E +R +QYV E E+D+I + + ++
Sbjct: 67 RGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKD 104
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 9.0
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 315 TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRIS 494
T S S ++ ++P S S ++ S T S S S THSS A +SSA+ S
Sbjct: 676 TLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTS 735
Query: 495 -SMRYLLSVRSSSTQVTS 545
+ L++ SS+T ++S
Sbjct: 736 VNSSTLITASSSNTLLSS 753
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,523,450
Number of Sequences: 5004
Number of extensions: 49792
Number of successful extensions: 196
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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