Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M19
(412 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 75 4e-14
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 75 4e-14
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 75 4e-14
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 71 8e-13
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 27 9.7
BT024373-1|ABC86435.1| 234|Drosophila melanogaster IP06821p pro... 27 9.7
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 27 9.7
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 27 9.7
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 27 9.7
AE014296-495|AAF47671.1| 208|Drosophila melanogaster CG14949-PA... 27 9.7
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 74.9 bits (176), Expect = 4e-14
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 32 LACVTPPYLVIR--CRVTGEKIHHT--ESGV*CEPYWPGLFAKALEGINVRDLITNIGSG 199
LACV +++ VTGEKI+ + V EPYWPGLFAKALEGINV+DLITNIGSG
Sbjct: 7 LACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSG 66
Query: 200 V-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 334
V DDDMGFGLFD
Sbjct: 67 VGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 74.9 bits (176), Expect = 4e-14
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 32 LACVTPPYLVIR--CRVTGEKIHHT--ESGV*CEPYWPGLFAKALEGINVRDLITNIGSG 199
LACV +++ VTGEKI+ + V EPYWPGLFAKALEGINV+DLITNIGSG
Sbjct: 7 LACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSG 66
Query: 200 V-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 334
V DDDMGFGLFD
Sbjct: 67 VGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 74.9 bits (176), Expect = 4e-14
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 32 LACVTPPYLVIR--CRVTGEKIHHT--ESGV*CEPYWPGLFAKALEGINVRDLITNIGSG 199
LACV +++ VTGEKI+ + V EPYWPGLFAKALEGINV+DLITNIGSG
Sbjct: 7 LACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSG 66
Query: 200 V-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 334
V DDDMGFGLFD
Sbjct: 67 VGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 70.5 bits (165), Expect = 8e-13
Identities = 43/90 (47%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 74 VTGEKIHHT--ESGV*CEPYWPGLFAKALEGINVRDLITNIGSGV-XXXXXXXXXXXXXX 244
VTGEKI+ + V EPYWPGLFAKALE INV+DLITNIGSGV
Sbjct: 23 VTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAA 82
Query: 245 XXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 334
DDDMGFGLFD
Sbjct: 83 APAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 305 DDDMGFGLFD 334
DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317
>BT024373-1|ABC86435.1| 234|Drosophila melanogaster IP06821p
protein.
Length = 234
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 118 TLHTAFSMVNFLTGNATSYYQIRRSNTS 35
TL S+VN +T + T++YQ+ RSNTS
Sbjct: 158 TLPLTGSIVN-ITHSDTAFYQLSRSNTS 184
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 305 DDDMGFGLFD 334
DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 305 DDDMGFGLFD 334
DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 305 DDDMGFGLFD 334
DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317
>AE014296-495|AAF47671.1| 208|Drosophila melanogaster CG14949-PA
protein.
Length = 208
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 118 TLHTAFSMVNFLTGNATSYYQIRRSNTS 35
TL S+VN +T + T++YQ+ RSNTS
Sbjct: 132 TLPLTGSIVN-ITHSDTAFYQLSRSNTS 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,102,722
Number of Sequences: 53049
Number of extensions: 214186
Number of successful extensions: 356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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