Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M17
(522 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 316 5e-87
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 316 6e-87
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 218 2e-57
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 218 2e-57
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 132 1e-31
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 126 1e-29
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 117 4e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 117 4e-27
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 108 2e-24
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 108 2e-24
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 103 8e-23
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 102 1e-22
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 102 2e-22
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 101 2e-22
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 101 2e-22
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 101 3e-22
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 100 7e-22
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 99 2e-21
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 99 2e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 99 2e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 99 2e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 99 2e-21
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 94 6e-20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 93 1e-19
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 89 1e-18
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 87 9e-18
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 83 1e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 81 6e-16
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 76 2e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 76 2e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 9e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 9e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 9e-14
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 73 2e-13
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 72 2e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 69 2e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 69 2e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 69 2e-12
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 67 8e-12
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 65 3e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 65 3e-11
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 60 7e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 60 7e-10
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 56 2e-08
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 38 0.004
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 37 0.008
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 36 0.023
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.16
Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 27 6.2
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00066-3|AAA50740.1| 177|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 27 8.1
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 316 bits (777), Expect = 5e-87
Identities = 150/171 (87%), Positives = 162/171 (94%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQQR+I I+K RDVIAQAQSGTGKTATFSIS+LQSLDT +RETQ L+LSPTRELA QIQ
Sbjct: 52 IQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQ 111
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
KV+LALGD+MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR LRTR+IK+
Sbjct: 112 KVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKL 171
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFMT 522
LVLDEADEMLNKGFKEQ+YD+YRYLPPG QVVL+S TLPHEILEMTSKFMT
Sbjct: 172 LVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMT 222
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 316 bits (776), Expect = 6e-87
Identities = 149/171 (87%), Positives = 162/171 (94%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQQR++ I+K RDVIAQAQSGTGKTATFSIS+LQSLDT +RETQ L+LSPTRELA QIQ
Sbjct: 52 IQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQ 111
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
KV+LALGD+MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR LRTR+IK+
Sbjct: 112 KVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKL 171
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFMT 522
LVLDEADEMLNKGFKEQ+YD+YRYLPPG QVVL+S TLPHEILEMTSKFMT
Sbjct: 172 LVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMT 222
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 218 bits (532), Expect = 2e-57
Identities = 105/170 (61%), Positives = 134/170 (78%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQ+R+I+P G+DVIAQAQSGTGKTATFS+SILQ +D Q LV++PTRELA QIQ
Sbjct: 55 IQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQ 114
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
KV+ ALG+++NV CIGGT++ +D RKL+ G HVV GTPGRV DMI R L T IKM
Sbjct: 115 KVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKM 174
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
VLDEADEML++GFK+QIY+V+R +P QVVL+S T+P E+L++T++FM
Sbjct: 175 FVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFM 224
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 218 bits (532), Expect = 2e-57
Identities = 105/170 (61%), Positives = 134/170 (78%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQ+R+I+P G+DVIAQAQSGTGKTATFS+SILQ +D Q LV++PTRELA QIQ
Sbjct: 55 IQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQ 114
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
KV+ ALG+++NV CIGGT++ +D RKL+ G HVV GTPGRV DMI R L T IKM
Sbjct: 115 KVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKM 174
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
VLDEADEML++GFK+QIY+V+R +P QVVL+S T+P E+L++T++FM
Sbjct: 175 FVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFM 224
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 132 bits (319), Expect = 1e-31
Identities = 72/170 (42%), Positives = 105/170 (61%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQ+ ++ P G+DV Q+Q+G+GKT I ILQ +D QV++L+P R +A +
Sbjct: 22 IQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAH 81
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
+ + +LG +NV C+G E+ D HV+ GTP D + T IKM
Sbjct: 82 EQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMGTPK---DFLSNIPSDTSRIKM 133
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
VLDEADEML+KGFK+QIY+V+R +P QVVL+S T+P E+L++T++FM
Sbjct: 134 FVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFM 183
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 126 bits (303), Expect = 1e-29
Identities = 60/170 (35%), Positives = 103/170 (60%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQ+ SI + G+D++A+A++GTGKT + I +++ + L+ Q +V+ PTRELA Q
Sbjct: 69 IQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTS 128
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 369
++ + L + ++ GGT+L +DI +L+ H+V TPGR+ D++ + V + K
Sbjct: 129 QICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKT 188
Query: 370 LVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
LVLDEAD++L++ F+ + + +LP QV+L S T P+ + K M
Sbjct: 189 LVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHM 238
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 117 bits (282), Expect = 4e-27
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL---DTTLRETQVLVLSPTRELAT 180
IQ+++I I+ G+DV+A +++G+GKTA F I +LQ L DTT + L++SPTRELA
Sbjct: 50 IQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELAL 107
Query: 181 QIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRS 360
Q KV+ LG F ++C +GG + E + ++ TPGR+ +I LR
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY 167
Query: 361 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFMT 522
++ +V DEAD + GF++Q+ + + +P Q +L S TLP +++ +T
Sbjct: 168 VQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLT 221
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 117 bits (282), Expect = 4e-27
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL---DTTLRETQVLVLSPTRELAT 180
IQ+++I I+ G+DV+A +++G+GKTA F I +LQ L DTT + L++SPTRELA
Sbjct: 50 IQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELAL 107
Query: 181 QIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRS 360
Q KV+ LG F ++C +GG + E + ++ TPGR+ +I LR
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY 167
Query: 361 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFMT 522
++ +V DEAD + GF++Q+ + + +P Q +L S TLP +++ +T
Sbjct: 168 VQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLT 221
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 108 bits (260), Expect = 2e-24
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Frame = +1
Query: 1 ARGIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELAT 180
A +Q I I++G D++ A++GTGKT F+I ILQ L L+L+PTRELA
Sbjct: 112 ATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAF 171
Query: 181 QIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR---RVLR 351
QI + ALG + ++C +GG +L R+L HVV TPGR+ D+I + +
Sbjct: 172 QIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAK 231
Query: 352 T-RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEI 495
+ I+ VLDEAD ML + +Q+ ++ + Q +L+S T+ + I
Sbjct: 232 VFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 108 bits (260), Expect = 2e-24
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Frame = +1
Query: 1 ARGIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELAT 180
A +Q I I++G D++ A++GTGKT F+I ILQ L L+L+PTRELA
Sbjct: 112 ATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAF 171
Query: 181 QIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR---RVLR 351
QI + ALG + ++C +GG +L R+L HVV TPGR+ D+I + +
Sbjct: 172 QIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAK 231
Query: 352 T-RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEI 495
+ I+ VLDEAD ML + +Q+ ++ + Q +L+S T+ + I
Sbjct: 232 VFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 103 bits (247), Expect = 8e-23
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Frame = +1
Query: 37 VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQ-----VLVLSPTRELATQIQKVIL 201
+ GRD+I+ A++G+GKT F + L + + VLVL PTRELA Q+Q+V +
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 202 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLD 381
+ ++ GG + G R L+ G +V TPGR+ D + + LVLD
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLD 283
Query: 382 EADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKF 516
EAD ML+ GF+ QI + + P Q ++ S T P E+ + S F
Sbjct: 284 EADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDF 328
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 102 bits (245), Expect = 1e-22
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
IQQ ++ ++G+DVI A++G+GKT F+I +LQSL + LVL+PTRELA QI
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIG 129
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIK 366
+ ALG + + +GG ++ L H++ TPGR+ D + + +++K
Sbjct: 130 QQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALK 189
Query: 367 MLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEM 504
L++DEAD +LN F+ ++ + + +P + L S T+ ++ ++
Sbjct: 190 FLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKL 235
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 102 bits (244), Expect = 2e-22
Identities = 58/176 (32%), Positives = 99/176 (56%), Gaps = 14/176 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-----QSLDTTLRETQV---LVLSPT 165
IQ + I + GRD+I A +G+GKT TF + ++ Q + ++ L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 166 RELATQIQKVILALGDFMN------VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 327
RELA QI +I+ + D + ++ CIGG +GE + + G H+V TPGR+ D
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSD 335
Query: 328 MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEI 495
M+ ++++ + LVLDEAD ML+ GF+++I ++ + Q +L S T+P +I
Sbjct: 336 MLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKI 391
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 101 bits (243), Expect = 2e-22
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
+Q I + G DV+ QA+SG GKTA F I+ LQ L+ E V+ + TRELA QI
Sbjct: 67 VQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQIS 126
Query: 190 KVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLRTRSI 363
K ++ V+ GG + +D +L + H+V GTPGR+ + R L+ +
Sbjct: 127 KEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKV 186
Query: 364 KMLVLDEADEML-NKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
K VLDE D+M+ + + + ++ + P QV++ S TLP E+ + +FM
Sbjct: 187 KYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFM 239
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 101 bits (243), Expect = 2e-22
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
+Q I + G DV+ QA+SG GKTA F I+ LQ L+ E V+ + TRELA QI
Sbjct: 67 VQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQIS 126
Query: 190 KVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLRTRSI 363
K ++ V+ GG + +D +L + H+V GTPGR+ + R L+ +
Sbjct: 127 KEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKV 186
Query: 364 KMLVLDEADEML-NKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
K VLDE D+M+ + + + ++ + P QV++ S TLP E+ + +FM
Sbjct: 187 KYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFM 239
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 101 bits (242), Expect = 3e-22
Identities = 60/170 (35%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQSLDTTLRE-TQVLVLSPTRELA 177
IQ +SI P+++G+DV+A A++G+GKT F +I +L L+ T V+++SPTREL+
Sbjct: 94 IQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELS 153
Query: 178 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR-VLRT 354
Q V+ L + N+ +GG+N + KL G ++ TPGR+ D ++
Sbjct: 154 MQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLV 213
Query: 355 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEM 504
R++K L++DEAD +L+ GF+ ++ V R+LP Q +L S T ++ E+
Sbjct: 214 RNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDEL 263
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 100 bits (239), Expect = 7e-22
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL--DTTLRETQ---VLVLSPTREL 174
IQ ++I I+ GRDVI A++G+GKT F + + + + L E ++L+PTREL
Sbjct: 330 IQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTREL 389
Query: 175 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR---RV 345
A Q K + ++ GG + E I L G +V TPGR+ D++ +V
Sbjct: 390 AMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKV 449
Query: 346 LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
R + LVLDEAD M +KGF+ QI V + P Q VL S T P + + K +
Sbjct: 450 TNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVL 507
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 98.7 bits (235), Expect = 2e-21
Identities = 52/173 (30%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
+Q R+I + GRD++ QA+SGTGKT FS+ +++LD+ Q ++++PTRE++ QI+
Sbjct: 48 VQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIK 107
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ---HVVSGTPGRVFDMIRRRVLRTRS 360
+ + + + +GG+ + +D Q +V GTPGR+ +++ +
Sbjct: 108 ETVRKVAP-TGARTSVYVGGS--AHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSH 164
Query: 361 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
+ VLDEAD+++++ F++ I + LP QV + S T P + + S F+
Sbjct: 165 VDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFL 217
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 98.7 bits (235), Expect = 2e-21
Identities = 52/173 (30%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
+Q R+I + GRD++ QA+SGTGKT FS+ +++LD+ Q ++++PTRE++ QI+
Sbjct: 48 VQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIK 107
Query: 190 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ---HVVSGTPGRVFDMIRRRVLRTRS 360
+ + + + +GG+ + +D Q +V GTPGR+ +++ +
Sbjct: 108 ETVRKVAP-TGARTSVYVGGS--AHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSH 164
Query: 361 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
+ VLDEAD+++++ F++ I + LP QV + S T P + + S F+
Sbjct: 165 VDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFL 217
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 98.7 bits (235), Expect = 2e-21
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL------------DTTLRETQ--- 144
+Q+ SI ++ RD+++ AQ+G+GKTA F + I+Q + T R T
Sbjct: 165 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPC 224
Query: 145 VLVLSPTRELATQIQKVILALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRV 321
LVLSPTRELA QI K N+Q GG N + + +L G H++ TPGR+
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 322 FDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY-RYLPPGT--QVVLISGTLPHE 492
D+I + + + LVLDEAD ML+ GF+ QI + + +PP T + S T P E
Sbjct: 285 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKE 344
Query: 493 ILEMTSKFM 519
I + F+
Sbjct: 345 IQVLAKDFL 353
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 98.7 bits (235), Expect = 2e-21
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL------------DTTLRETQ--- 144
+Q+ SI ++ RD+++ AQ+G+GKTA F + I+Q + T R T
Sbjct: 149 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPC 208
Query: 145 VLVLSPTRELATQIQKVILALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRV 321
LVLSPTRELA QI K N+Q GG N + + +L G H++ TPGR+
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
Query: 322 FDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY-RYLPPGT--QVVLISGTLPHE 492
D+I + + + LVLDEAD ML+ GF+ QI + + +PP T + S T P E
Sbjct: 269 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKE 328
Query: 493 ILEMTSKFM 519
I + F+
Sbjct: 329 IQVLAKDFL 337
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 98.7 bits (235), Expect = 2e-21
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL------------DTTLRETQ--- 144
+Q+ SI ++ RD+++ AQ+G+GKTA F + I+Q + T R T
Sbjct: 146 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPC 205
Query: 145 VLVLSPTRELATQIQKVILALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRV 321
LVLSPTRELA QI K N+Q GG N + + +L G H++ TPGR+
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
Query: 322 FDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY-RYLPPGT--QVVLISGTLPHE 492
D+I + + + LVLDEAD ML+ GF+ QI + + +PP T + S T P E
Sbjct: 266 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKE 325
Query: 493 ILEMTSKFM 519
I + F+
Sbjct: 326 IQVLAKDFL 334
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 95.1 bits (226), Expect = 3e-20
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Frame = +1
Query: 16 QRSILPI-VKGRDVIAQAQSGTGKTATFSISIL---QSLDTTLRETQ------VLVLSPT 165
QR +PI ++ RDVI A++G+GKTA F + +L SL R+ ++++PT
Sbjct: 328 QRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPT 387
Query: 166 RELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV 345
RELA QI++ G + ++ + IGG + + KL G VV TPGR+ D++ R
Sbjct: 388 RELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRY 447
Query: 346 LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 447
L ++LDEAD ML+ GF+ + V Y+P
Sbjct: 448 LLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 93.9 bits (223), Expect = 6e-20
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQ 189
+Q I + G DV+ QA+SG GKTA F I+ LQ L+ E V+ + TRELA QI
Sbjct: 66 VQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQIS 125
Query: 190 KVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLRTRSI 363
K ++ V+ GG + +D +L + H+V GTPGR+ + R L+ +
Sbjct: 126 KEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKV 185
Query: 364 KMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
K VLDE D+M+ D+ R + QV++ S TLP E+ + +FM
Sbjct: 186 KYFVLDECDKMIGDA------DMRRDVQEIKQVMMFSATLPKELRTVCKRFM 231
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 93.1 bits (221), Expect = 1e-19
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 28/195 (14%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRE---TQVLVLSPTRELAT 180
IQQ I + G+D+ A A +GTGKTA F + IL+ + + T+VLVL PTRELA
Sbjct: 174 IQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAI 233
Query: 181 QIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR-------- 336
Q+ +V L F+ ++ C GG +L L G VV TPGR+ D +
Sbjct: 234 QVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLS 293
Query: 337 -----------------RRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVV 465
R++ + + ++LVLDEAD ML + F++Q+ ++ R Q +
Sbjct: 294 NIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTL 353
Query: 466 LISGTLPHEILEMTS 510
L S T+ EI E+ S
Sbjct: 354 LFSATMTEEIDELAS 368
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 91.9 bits (218), Expect = 3e-19
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Frame = +1
Query: 49 DVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFM-NV 225
++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N+
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 226 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEML- 399
+ H I G N+ +R + +V GTPG D +++ + + I+ LVLDEAD M+
Sbjct: 310 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIY 368
Query: 400 NKGFKE---QIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
++GF + IY++ Q +L S T ++ +K +
Sbjct: 369 HQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKII 411
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 91.9 bits (218), Expect = 3e-19
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Frame = +1
Query: 49 DVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFM-NV 225
++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N+
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 226 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEML- 399
+ H I G N+ +R + +V GTPG D +++ + + I+ LVLDEAD M+
Sbjct: 335 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIY 393
Query: 400 NKGFKE---QIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
++GF + IY++ Q +L S T ++ +K +
Sbjct: 394 HQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKII 436
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 91.9 bits (218), Expect = 3e-19
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Frame = +1
Query: 49 DVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFM-NV 225
++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N+
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 226 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEML- 399
+ H I G N+ +R + +V GTPG D +++ + + I+ LVLDEAD M+
Sbjct: 719 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIY 777
Query: 400 NKGFKE---QIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFM 519
++GF + IY++ Q +L S T ++ +K +
Sbjct: 778 HQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKII 820
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 89.4 bits (212), Expect = 1e-18
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQ----VLVLSPTRELA 177
IQ+ +I + G DV+ A++G+GKT I +L++L L++SPTRELA
Sbjct: 102 IQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELA 161
Query: 178 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRT 354
Q I A+G C IGG+++ + ++ G +++ TPGR+ M +
Sbjct: 162 LQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRLLQHMDENAQMSC 220
Query: 355 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEM 504
S+++LVLDEAD ML+ GF +Q+ + LP Q +L S T + ++
Sbjct: 221 DSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDL 270
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 86.6 bits (205), Expect = 9e-18
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Frame = +1
Query: 34 IVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQ-----------VLVLSPTRELAT 180
++ G+D I +Q+G+GKT F + L +D L + + VLVLSPTRELA
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177
Query: 181 QIQKVILALGDFMNVQCHACI-GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 357
QI+ + N C+ GG + E + G +V TPGR+ D+ V+
Sbjct: 178 QIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLA 235
Query: 358 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKF 516
S+ +VLDEAD ML+ GF+ I + + P V L S T P + ++T K+
Sbjct: 236 SVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKY 288
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 83.0 bits (196), Expect = 1e-16
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Frame = +1
Query: 1 ARGIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL--DTTLRETQV----LVLSP 162
A +Q+ I ++ ++++ +A++G+GKT F I ++Q L ++ + V ++++P
Sbjct: 112 ANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAP 171
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
T+EL TQI K+ + L + + N E+ L+ HVV TPG++ M R
Sbjct: 172 TKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLR 231
Query: 343 VLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMTSKFMT 522
+ LV+DEAD +L+ G++E++ + LPP Q ++ S TL ++ + FMT
Sbjct: 232 PEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMT 291
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 80.6 bits (190), Expect = 6e-16
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL-----DTTLRET----------- 141
+Q+ SI + GRD+++ AQ+G+GKTA F + ++ ++ D R
Sbjct: 192 VQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYP 251
Query: 142 QVLVLSPTRELATQIQKVILALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGR 318
LVLSPTREL+ QI + GG N + I KL G H++ TPGR
Sbjct: 252 SALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGR 311
Query: 319 VFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY--RYLPPGTQ--VVLISGTLP 486
+ D++ + ++ + LVLDEAD ML+ GF+ QI + +P + + S T P
Sbjct: 312 LIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFP 371
Query: 487 HEILEMTSKFM 519
EI + F+
Sbjct: 372 KEIQLLAQDFL 382
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 79.0 bits (186), Expect = 2e-15
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFS----ISILQSLDTTLRETQVLVLS-PTREL 174
IQ +I + GRDV+ A++G+GKTA + + I+ D E V V+ PTREL
Sbjct: 291 IQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTREL 350
Query: 175 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLR 351
A Q+ + N+ GG + E +L + G +V TPGR+ D+++
Sbjct: 351 AIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATN 410
Query: 352 TRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEI 495
LV DEAD M + GF+ Q+ + ++ P Q ++ S T ++
Sbjct: 411 FLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKV 458
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 75.8 bits (178), Expect = 2e-14
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQS--LDTTLR-------ETQVLVLSP 162
IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + ++L+P
Sbjct: 324 IQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTP 383
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
TRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 384 TRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDG 443
Query: 343 VLRTRSIKMLVLDEADEMLNK-GFKEQIYDV--YRYLPPG--TQVVLISGTLPHEILEMT 507
++ + LVLDEAD M++ GF +I + Y+ +P Q ++ S T P + E
Sbjct: 444 AIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAA 503
Query: 508 SKFM 519
K +
Sbjct: 504 RKLL 507
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 75.8 bits (178), Expect = 2e-14
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQS--LDTTLR-------ETQVLVLSP 162
IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + ++L+P
Sbjct: 324 IQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTP 383
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
TRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 384 TRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDG 443
Query: 343 VLRTRSIKMLVLDEADEMLNK-GFKEQIYDV--YRYLPPG--TQVVLISGTLPHEILEMT 507
++ + LVLDEAD M++ GF +I + Y+ +P Q ++ S T P + E
Sbjct: 444 AIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAA 503
Query: 508 SKFM 519
K +
Sbjct: 504 RKLL 507
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 73.3 bits (172), Expect = 9e-14
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Frame = +1
Query: 16 QRSILPIV-KGRDVIAQAQSGTGKTATFSISILQSL--DTTLRET-------QVLVLSPT 165
Q+ LP+V +G D++A AQ+G+GKTA F + I+ L D L + ++L+PT
Sbjct: 368 QQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
Query: 166 RELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV 345
RELA QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 428 RELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT 487
Query: 346 LRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILEMTS 510
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 511 KFM 519
F+
Sbjct: 548 AFL 550
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 73.3 bits (172), Expect = 9e-14
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Frame = +1
Query: 16 QRSILPIV-KGRDVIAQAQSGTGKTATFSISILQSL--DTTLRET-------QVLVLSPT 165
Q+ LP+V +G D++A AQ+G+GKTA F + I+ L D L + ++L+PT
Sbjct: 368 QQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
Query: 166 RELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV 345
RELA QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 428 RELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT 487
Query: 346 LRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILEMTS 510
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 511 KFM 519
F+
Sbjct: 548 AFL 550
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 73.3 bits (172), Expect = 9e-14
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Frame = +1
Query: 16 QRSILPIV-KGRDVIAQAQSGTGKTATFSISILQSL--DTTLRET-------QVLVLSPT 165
Q+ LP+V +G D++A AQ+G+GKTA F + I+ L D L + ++L+PT
Sbjct: 368 QQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
Query: 166 RELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV 345
RELA QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 428 RELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT 487
Query: 346 LRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILEMTS 510
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 511 KFM 519
F+
Sbjct: 548 AFL 550
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 72.5 bits (170), Expect = 2e-13
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Frame = +1
Query: 43 GRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFMN 222
G +A AQ+ G +S + S+D++ ++L PTREL Q + I ++
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSST--PLCVILEPTRELVQQTFQNIQTFASVLD 309
Query: 223 ---VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADE 393
++C G N+ + +R L+ G +V GTP RVFD+I L T++++ +V+DE D+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQ 369
Query: 394 ML--NKGFKEQIYDVYRYLP----PGT--QVVLISGTLPH-EILEMTSKFMT 522
L QI ++R LP GT QV+ S TL + E+ + M+
Sbjct: 370 FLAGKNNCAHQIESIFRVLPLVAQDGTRRQVIACSATLHNFEVCRFADRHMS 421
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 114
+Q +I I+ G D + A++G+GKT FS+ I Q
Sbjct: 28 VQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 72.1 bits (169), Expect = 2e-13
Identities = 41/152 (26%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Frame = +1
Query: 49 DVIAQAQSGTGKTATFSISILQSLDTT-LRETQV--LVLSPTRELATQIQKVILALGDFM 219
DV+ ++ +G+GKT F + +++ + L+ + L+LSP+REL +QI VI + +
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 220 NVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGRVFDMIRRR----VLRTRSIKMLVLDE 384
N+ GG + ++I+ + +++ TPGR+F +I+ + R++++LV+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 385 ADEMLNKGFKEQIYDVYRYLPPGTQVVLISGT 480
AD F++ + ++ +P + L S T
Sbjct: 168 ADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 2e-12
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL-DTTLRET--------QVLVLSP 162
IQQ ++ I +G D++A AQ+G+GKTA F + I+ L D T + ++L+P
Sbjct: 578 IQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
TREL QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 638 TRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEG 697
Query: 343 VLRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILE 501
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 698 TIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 68.9 bits (161), Expect = 2e-12
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL-DTTLRET--------QVLVLSP 162
IQQ ++ I +G D++A AQ+G+GKTA F + I+ L D T + ++L+P
Sbjct: 578 IQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
TREL QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 638 TRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEG 697
Query: 343 VLRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILE 501
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 698 TIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 2e-12
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL-DTTLRET--------QVLVLSP 162
IQQ ++ I +G D++A AQ+G+GKTA F + I+ L D T + ++L+P
Sbjct: 578 IQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 163 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 342
TREL QI ++ GG +G + +++ G ++ GT GR+
Sbjct: 638 TRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEG 697
Query: 343 VLRTRSIKMLVLDEADEMLN-KGFKEQIYDVYRY--LP--PGTQVVLISGTLPHEILE 501
++ + VLDEAD M++ GF I + Y +P Q ++ S T P + E
Sbjct: 698 TIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 66.9 bits (156), Expect = 8e-12
Identities = 39/125 (31%), Positives = 66/125 (52%)
Frame = +1
Query: 148 LVLSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 327
++++PT+EL TQI K+ + L + + N E+ L+ HVV TPG++
Sbjct: 100 VIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLR 159
Query: 328 MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISGTLPHEILEMT 507
M R + LV+DEAD +L+ G++E++ + LPP Q ++ S TL ++ +
Sbjct: 160 MCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLK 219
Query: 508 SKFMT 522
FMT
Sbjct: 220 KLFMT 224
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 66.1 bits (154), Expect = 1e-11
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Frame = +1
Query: 4 RGIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQ----------VLV 153
R IQ I ++ G DV+ QA++ GKTA F + I+ + ET+ L+
Sbjct: 405 RTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALI 464
Query: 154 LSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 333
L+PTRELA QI + + ++ G ++ + ++ G ++ GT GR+ D
Sbjct: 465 LAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFT 524
Query: 334 RRRVLRTRSIKMLVLDEADEMLNKGFKEQI 423
+ + ++ LV DEAD +L K+ +
Sbjct: 525 VKSHISLLHLRFLVFDEADRLLQDMKKDPL 554
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 65.3 bits (152), Expect = 3e-11
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL--------DTTLRE--TQVLVLS 159
IQ+ S PI+ G DV+A A +G+GKT F I + L D T + ++L+++
Sbjct: 762 IQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVA 821
Query: 160 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRVFDMI 333
PTREL Q L ++C GG + +++ L + Q +++ T GR+ D +
Sbjct: 822 PTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
Query: 334 RRRVLRTRSIKMLVLDEADEMLNKG-FKEQIYDVYRYLPPGT-QVVLISGTLPHEI 495
+ +K +VLDEAD M++ F E++ + T Q VL S + ++
Sbjct: 882 NAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 65.3 bits (152), Expect = 3e-11
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL--------DTTLRE--TQVLVLS 159
IQ+ S PI+ G DV+A A +G+GKT F I + L D T + ++L+++
Sbjct: 762 IQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVA 821
Query: 160 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRVFDMI 333
PTREL Q L ++C GG + +++ L + Q +++ T GR+ D +
Sbjct: 822 PTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
Query: 334 RRRVLRTRSIKMLVLDEADEMLNKG-FKEQIYDVYRYLPPGT-QVVLISGTLPHEI 495
+ +K +VLDEAD M++ F E++ + T Q VL S + ++
Sbjct: 882 NAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 60.5 bits (140), Expect = 7e-10
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 19/151 (12%)
Frame = +1
Query: 16 QRSILPI-VKGR-DVIAQAQSGTGKTATFSISI----LQSLD-------TTLRETQVLVL 156
Q ++LP V+ R DV+ A++G+GKT F I + L+S D T +R + L++
Sbjct: 15 QSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIV 74
Query: 157 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMI 333
+PTREL QI K I AL + + +GG + R + + +V TPGR++ M+
Sbjct: 75 APTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 134
Query: 334 RRR-----VLRTRSIKMLVLDEADEMLNKGF 411
+ + + +K LV+DE D M+ +G+
Sbjct: 135 QEAETGEFLAEWKDLKCLVVDETDRMVEEGY 165
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 60.5 bits (140), Expect = 7e-10
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 19/151 (12%)
Frame = +1
Query: 16 QRSILPI-VKGR-DVIAQAQSGTGKTATFSISI----LQSLD-------TTLRETQVLVL 156
Q ++LP V+ R DV+ A++G+GKT F I + L+S D T +R + L++
Sbjct: 182 QSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIV 241
Query: 157 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMI 333
+PTREL QI K I AL + + +GG + R + + +V TPGR++ M+
Sbjct: 242 APTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
Query: 334 RRR-----VLRTRSIKMLVLDEADEMLNKGF 411
+ + + +K LV+DE D M+ +G+
Sbjct: 302 QEAETGEFLAEWKDLKCLVVDETDRMVEEGY 332
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 56.0 bits (129), Expect = 2e-08
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL----------DTTLRETQVLVLS 159
IQ +SI + + R+V+A A +G+GKT F++ ++ + + + +VL
Sbjct: 152 IQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLE 211
Query: 160 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR 339
PTRELA Q +F+ + I N + + + +VS TP R+ + +
Sbjct: 212 PTRELAAQ------TYTEFLKYCANTSISAANFSGEETDIQHADILVS-TPNRIVFHLDK 264
Query: 340 RVLRTRSIKMLVLDEADEML------NKGFKEQIYDVYRYLPPG-TQVVLISGTLPHEI 495
+ T S++ LV+DE+D + +K F+ Q+ +Y+ T+V S T HE+
Sbjct: 265 --IDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEV 321
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Frame = +1
Query: 31 PIVKGRDVIAQAQSGTGKTATFSISILQSLDT-TLRETQVLVLSPTRELATQIQKVILAL 207
P ++ RDV A +G+GKT + + +L ++ + + Q ++L P + L QI
Sbjct: 152 PPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRW 211
Query: 208 GDFMNVQCHACIGGTN-LGEDIRKL-DYGQHVVSGTPGRVFDMIRRRV---LRTRSIKML 372
D V + G N ++ R+L +V+ TP R+ + ++ + ++ L
Sbjct: 212 NDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLRFL 271
Query: 373 VLDEADEMLNKGFKEQIYDVYRYLPPGTQVV 465
++DEAD M K +E+ D+ +L G + V
Sbjct: 272 IVDEADRM-GKLMREEWLDLVEFLCGGMERV 301
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.002
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSI----------SILQSLDTTLRETQVLVLS 159
+QQ+SI I R ++ A +G GKT F I +L ++ TT T +L+L+
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPT-ILILA 176
Query: 160 PTRELATQI---QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDM 330
T L Q+ +V+L L D ++ I L + + T G++
Sbjct: 177 NTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKAS 236
Query: 331 IRRRVLRTRSIKMLVLDEADEMLN 402
I + + ++KM++LDE+D+M++
Sbjct: 237 IEDKTILLDNLKMMILDESDKMID 260
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 37.9 bits (84), Expect = 0.004
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Frame = +1
Query: 4 RGIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQS---------LDTTLRETQVLVL 156
R +QQ SI I +GR ++ +A +G GKT F I +++ ++T +L++
Sbjct: 17 RRVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIM 76
Query: 157 SPTRELATQI---QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVF 324
+ T L Q+ ++IL L NV+ I L + GQ + T G++
Sbjct: 77 ASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVAN-HPFTKGQCDIAFCTIGKLK 135
Query: 325 DMIRRRVLRTRSIKMLVLDEADEMLN 402
I + ++K ++LDEAD+M++
Sbjct: 136 ATIECGDVCLDNLKTIILDEADKMID 161
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 37.1 bits (82), Expect = 0.008
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Frame = +1
Query: 49 DVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFMNVQ 228
+VI A +G+GKTA +++L+ + T E + + ++P ++AT++ D+ +
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV------YADWKR-R 1390
Query: 229 CHACIGGTNL---GE---DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 390
IG T + GE D++ GQ ++S TP R +D I RR + +S++ + L AD
Sbjct: 1391 LEPAIGHTIVLLTGEQTMDLKLAQRGQLIIS-TPER-WDNISRRWKQRKSVQNVKLFIAD 1448
Query: 391 EM 396
++
Sbjct: 1449 DL 1450
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 35.5 bits (78), Expect = 0.023
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Frame = +1
Query: 10 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQS---------LDTTLRETQVLVLSP 162
+QQ SI I +GR ++ +A +G GKT F I +++ + T +L+++
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 163 TRELATQI---QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDM 330
T L Q+ ++IL L NV+ I L + GQ + T G++
Sbjct: 179 TSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVAN-HPFTKGQCDIAFCTIGKLKAT 237
Query: 331 IRRRVLRTRSIKMLVLDEADEMLN 402
I + ++K ++LDEAD+M++
Sbjct: 238 IECGDVCLDNLKTIILDEADKMID 261
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 52 VIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVILALGDFMNVQC 231
V Q GTGKT T ++ + + + ++ QV+VL+PTRE I+ + M ++
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 232 H 234
H
Sbjct: 142 H 142
>Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical
protein T05F1.10 protein.
Length = 305
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 441 ITVNIIYLFFETLVQHLISFIKY 373
I + I+ L F L+Q+LIS IKY
Sbjct: 4 IILEIVILLFNLLIQNLISLIKY 26
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 316 RVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVV 465
++ + IRR V++ + +L + NKG + I V +YLP ++VV
Sbjct: 276 QIHEAIRRTVVKRAFVPVL---SGSALKNKGVQTMINSVVKYLPDPSEVV 322
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 411 ETLVQHLISFIKYQHFY*SGTQYT 340
E+L +H+ S ++YQH S TQYT
Sbjct: 192 ESLSRHIESALRYQHTATSRTQYT 215
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 292 VDHNLTS*CLHQDLSHQYMHGIARS 218
VDH + C+H++++H ++H I S
Sbjct: 27 VDHLIERACIHRNMNHSHIHTILLS 51
>U00066-3|AAA50740.1| 177|Caenorhabditis elegans Hypothetical
protein R12B2.2 protein.
Length = 177
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 365 KCWYLMKLMRC*TRVSKNRYMMFTVIYPQE 454
KC +L + +RC SKN Y++ T++ Q+
Sbjct: 89 KCKFLAQSIRCDELTSKNEYLLKTLVGIQQ 118
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 292 VDHNLTS*CLHQDLSHQYMHGIARS 218
VDH + C+H++++H ++H I S
Sbjct: 27 VDHLIERACIHRNMNHSHIHTILLS 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,588,472
Number of Sequences: 27780
Number of extensions: 271604
Number of successful extensions: 724
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -