Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M14
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 238 1e-63
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 238 1e-63
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 238 1e-63
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 238 1e-63
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 235 9e-63
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 235 9e-63
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 235 1e-62
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 235 1e-62
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 235 1e-62
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 33 0.080
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 31 0.43
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 0.75
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 30 0.99
Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical pr... 29 1.3
X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein. 29 2.3
U21324-2|AAX22294.1| 571|Caenorhabditis elegans Cell death abno... 29 2.3
U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death abno... 29 2.3
Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 28 3.0
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 28 3.0
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 28 4.0
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 27 9.2
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 27 9.2
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 27 9.2
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 238 bits (583), Expect = 1e-63
Identities = 122/162 (75%), Positives = 133/162 (82%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
GRFKGTV +L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA
Sbjct: 54 GRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DN
Sbjct: 114 NAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 238 bits (583), Expect = 1e-63
Identities = 122/162 (75%), Positives = 133/162 (82%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
GRFKGTV +L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA
Sbjct: 54 GRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DN
Sbjct: 114 NAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 238 bits (583), Expect = 1e-63
Identities = 122/162 (75%), Positives = 133/162 (82%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
GRFKGTV +L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA
Sbjct: 54 GRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DN
Sbjct: 114 NAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 238 bits (583), Expect = 1e-63
Identities = 122/162 (75%), Positives = 133/162 (82%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
GRFKGTV +L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA
Sbjct: 54 GRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DN
Sbjct: 114 NAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 235 bits (576), Expect = 9e-63
Identities = 122/162 (75%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
G+FKGTV L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KA
Sbjct: 54 GQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
SAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DN
Sbjct: 114 SAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 235 bits (576), Expect = 9e-63
Identities = 122/162 (75%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
G+FKGTV L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KA
Sbjct: 54 GQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
SAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DN
Sbjct: 114 SAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 235 bits (575), Expect = 1e-62
Identities = 121/162 (74%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
G+FKGTV L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KA
Sbjct: 54 GQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
SAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DN
Sbjct: 114 SAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 235 bits (575), Expect = 1e-62
Identities = 121/162 (74%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
G+FKGTV L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KA
Sbjct: 54 GQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
SAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DN
Sbjct: 114 SAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 235 bits (575), Expect = 1e-62
Identities = 121/162 (74%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = +2
Query: 8 GRFKGTVEAVDGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKA 172
G+FKGTV L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KA
Sbjct: 54 GQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKA 113
Query: 173 SAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDN 349
SAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DN
Sbjct: 114 SAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDN 173
Query: 350 FEIIEGLMTTVHATTGTQKTVDGPSGKLWRDGRGAQQNIIPA 475
F IIEGLMTTVHA T TQKTVDGPSGKLWRDGRGA QNIIPA
Sbjct: 174 FGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPA 215
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 33.5 bits (73), Expect = 0.080
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = -3
Query: 255 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIA---WGSL 85
L P T G + ++ ++PPT TPV +TT + PA P G++
Sbjct: 459 LAPPTTPGPTFYPVTTVSTMSPPTT---VTVPTTPTPVPTTTNTPPANPTTATPTTVGTM 515
Query: 84 SENTA---IFFPFTTRCPSTASTVPLKRPS 4
+ +T + P TT P+T +T P+ +P+
Sbjct: 516 TPSTGTTTVPVPTTTGSPTTQTTAPVTKPT 545
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 31.1 bits (67), Expect = 0.43
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 193 STHQVSRSFISGCEHTG*FNNVFSTS---LTPWNSMGIPLREHSYLLSVYDEVSIYGLNG 23
S H + S ++G EH FN S+ W+S R Y S+ DE+ + LNG
Sbjct: 1337 SGHSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSS-----RNVYYADSMNDEIGVASLNG 1391
Query: 22 TLETTLV 2
+ +LV
Sbjct: 1392 KFKKSLV 1398
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 0.75
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 264 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 85
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 793 APETTSTEPPSSSTSPVQTTTITAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 848
Query: 84 SENTAIFFPFTTRCPSTASTVP 19
S +T+ TT P T ST P
Sbjct: 849 SSSTSPVQTTTTTAPETTSTEP 870
Score = 29.9 bits (64), Expect = 0.99
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 264 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 85
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 655 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 710
Query: 84 SENTAIFFPFTTRCPSTASTVP 19
S +T+ TT P T ST P
Sbjct: 711 SSSTSPVQTTTTTAPETTSTEP 732
Score = 27.5 bits (58), Expect = 5.3
Identities = 26/82 (31%), Positives = 33/82 (40%)
Frame = -3
Query: 264 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 85
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 747 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 802
Query: 84 SENTAIFFPFTTRCPSTASTVP 19
S +T+ T P T ST P
Sbjct: 803 SSSTSPVQTTTITAPETTSTEP 824
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 29.9 bits (64), Expect = 0.99
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = -3
Query: 255 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSLSEN 76
+TP T + L A T + P T+ A V ++TP T + P P WG+ +
Sbjct: 627 VTPMTEATGAFLSAGS-TAMTPSTQGTGATGVTMSTPGTMATGTTPMTPTVSVWGTNTPA 685
Query: 75 TAIFFPFTTRCPSTASTVP 19
P T R + P
Sbjct: 686 VTPASPTTIRLADPGAVTP 704
>Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical
protein T22C8.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +2
Query: 20 GTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAK 199
G ++ D H V GK+ A+F E IP+ +A E ++ G+ D AHL+ K
Sbjct: 59 GILQNEDQHFV-GGKQFAIFYEHSFGKIPYFKAQNESDPKNGGLPQMGD-LEAHLIQAEK 116
Query: 200 KVIISAPSADAPMFVVGVNLEAYDPSYKV 286
+ + P + V +++E + P +++
Sbjct: 117 DINETIPDENFNGIAV-IDIEEFRPMWEL 144
>X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein.
Length = 549
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 460 LLSPTAIAPQFSRRSINS--LLG-ASSGMHCSHQTFNNFKVV--VDDLCE 326
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>U21324-2|AAX22294.1| 571|Caenorhabditis elegans Cell death
abnormality protein4, isoform b protein.
Length = 571
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 460 LLSPTAIAPQFSRRSINS--LLG-ASSGMHCSHQTFNNFKVV--VDDLCE 326
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death
abnormality protein4, isoform a protein.
Length = 549
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 460 LLSPTAIAPQFSRRSINS--LLG-ASSGMHCSHQTFNNFKVV--VDDLCE 326
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical
protein F43D9.3b protein.
Length = 689
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 335 VIHDNFEIIEGLMTTVHATTGTQKTVD---GPSGKLWRDGRGA 454
++HD E+ + +T ++TG +K D G S KLW + +G+
Sbjct: 302 LMHDVLELDQNRVTISTSSTGKKKDYDMATGGSDKLWNNHKGS 344
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 335 VIHDNFEIIEGLMTTVHATTGTQKTVD---GPSGKLWRDGRGA 454
++HD E+ + +T ++TG +K D G S KLW + +G+
Sbjct: 302 LMHDVLELDQNRVTISTSSTGKKKDYDMATGGSDKLWNNHKGS 344
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 2 HEGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYV 133
H+G K A++ L G K+ F+ERD A+ + QAGA+ V
Sbjct: 88 HKGTGKRASAALESELNAIGAKLNSFTERDQTAV-FVQAGAQDV 130
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 17 KGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGA 196
KGT++ +D V GKK+A E G++GA+ G KA A GGA
Sbjct: 707 KGTLKELDAFFVAYGKKLA---EGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGAG--GGA 761
Query: 197 KK 202
KK
Sbjct: 762 KK 763
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 261 SRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHG 103
S T TT+ + T +APPT + + T V +TT S P P G
Sbjct: 27 STTTTTTSPAPNITTTTTTTTIAPPTNTTTTI-LTTTTTVTTTTTSPPLIPDG 78
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 364 RFDDYSACHYWHPEDC*WTFWKTV 435
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 364 RFDDYSACHYWHPEDC*WTFWKTV 435
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 364 RFDDYSACHYWHPEDC*WTFWKTV 435
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 364 RFDDYSACHYWHPEDC*WTFWKTV 435
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,057,360
Number of Sequences: 27780
Number of extensions: 268366
Number of successful extensions: 735
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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