Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_M12
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    26   0.15 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   2.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   9.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 284 ISKLFGSDSETPDKADEKPDDTTQETKNKTQNP 382
           I +LFG D +  D   EK  +  ++ KNK   P
Sbjct: 445 IKRLFGKDRKIMDMVREKIIEEKRKNKNKNLTP 477


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 120 WANTPAKTSNIKALKHTSIWMIP 188
           +A    K  +I  L+HT IW+ P
Sbjct: 209 YAMAVMKMCDILHLRHTKIWLRP 231


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 403 FLSCCFVRILGFIFCFLSRIIRF 335
           F S  F+ I  FIF + + ++RF
Sbjct: 11  FPSTSFILINYFIFLYFNSLVRF 33


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 296 FGSDSETPDKADEKPDDTTQETKNKTQNP 382
           F + ++T DK    PD   +  +N+  NP
Sbjct: 885 FANLTQTLDKLIRSPDTLRKIAQNRGTNP 913


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 99  WSVLRQRWANTPAKTSNIKAL 161
           W ++ Q W+  P+K   + A+
Sbjct: 832 WRLMEQCWSGEPSKRPLLGAI 852


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 99  WSVLRQRWANTPAKTSNIKAL 161
           W ++ Q W+  P+K   + A+
Sbjct: 870 WRLMEQCWSGEPSKRPLLGAI 890


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 98  MRLWSDLKCQCIGVQSTVYGLV 33
           + LWS    QCI  +  V+  V
Sbjct: 354 VNLWSGFCSQCIWQEKIVFAAV 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,940
Number of Sequences: 438
Number of extensions: 1823
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)