Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_M10
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   2.7  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   6.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   6.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   6.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   6.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.2  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 435 LLTALNNHCMF*HR*ERT*MYKMIYMNIN 349
           ++++L+N C + +       YK +Y NIN
Sbjct: 303 IISSLSNSCNYSNNYYNNNNYKKLYYNIN 331


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 396 YAKTYNDYLTQLRVCEIRAEPQTHSML 476
           Y    +DY T +RV  I   PQ  ++L
Sbjct: 98  YTDGSDDYSTLIRVRVIDVRPQNETIL 124


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 396 YAKTYNDYLTQLRVCEIRAEPQTHSML 476
           Y    +DY T +RV  I   PQ  ++L
Sbjct: 146 YTDGSDDYSTLIRVRVIDVRPQNETIL 172


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 396 YAKTYNDYLTQLRVCEIRAEPQTHSML 476
           Y    +DY T +RV  I   PQ  ++L
Sbjct: 146 YTDGSDDYSTLIRVRVIDVRPQNETIL 172


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 396 YAKTYNDYLTQLRVCEIRAEPQTHSML 476
           Y    +DY T +RV  I   PQ  ++L
Sbjct: 146 YTDGSDDYSTLIRVRVIDVRPQNETIL 172


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 45  VSAEKVYLRNKDVPPTLWGKSGSHGGEAAST 137
           V+A  V    +   P+  G S  H G +AST
Sbjct: 48  VAAAAVNYAQQHNSPSPTGSSPQHSGSSAST 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,652
Number of Sequences: 438
Number of extensions: 3506
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)