Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M07
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34531-1|CAA84292.1| 454|Homo sapiens coproporphyrinogen oxidas... 100 3e-21
Z28409-1|CAA82250.1| 354|Homo sapiens coproporphyrinogen oxidas... 100 3e-21
D16611-1|BAA04033.1| 354|Homo sapiens coproporphyrinogen oxidas... 100 3e-21
BC023554-1|AAH23554.1| 454|Homo sapiens coproporphyrinogen oxid... 100 3e-21
BC023551-1|AAH23551.1| 454|Homo sapiens coproporphyrinogen oxid... 100 3e-21
BC017210-1|AAH17210.1| 454|Homo sapiens coproporphyrinogen oxid... 100 3e-21
AK223481-1|BAD97201.1| 454|Homo sapiens coproporphyrinogen oxid... 100 3e-21
BC111799-1|AAI11800.1| 1690|Homo sapiens kinesin family member 1... 29 9.2
BC111780-1|AAI11781.1| 1690|Homo sapiens kinesin family member 1... 29 9.2
AC011298-1|AAX93239.1| 1690|Homo sapiens unknown protein. 29 9.2
AB210029-1|BAE06111.1| 1478|Homo sapiens KIF1A variant protein p... 29 9.2
>Z34531-1|CAA84292.1| 454|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 454
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 129 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 187
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 188 GGISCVLQDGCVFEKAGVSISVV 210
>Z28409-1|CAA82250.1| 354|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 354
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 29 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 87
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 88 GGISCVLQDGCVFEKAGVSISVV 110
>D16611-1|BAA04033.1| 354|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 354
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 29 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 87
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 88 GGISCVLQDGCVFEKAGVSISVV 110
>BC023554-1|AAH23554.1| 454|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 454
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 129 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 187
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 188 GGISCVLQDGCVFEKAGVSISVV 210
>BC023551-1|AAH23551.1| 454|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 454
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 129 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 187
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 188 GGISCVLQDGCVFEKAGVSISVV 210
>BC017210-1|AAH17210.1| 454|Homo sapiens coproporphyrinogen oxidase
protein.
Length = 454
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 129 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 187
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 188 GGISCVLQDGCVFEKAGVSISVV 210
>AK223481-1|BAD97201.1| 454|Homo sapiens coproporphyrinogen oxidase
variant protein.
Length = 454
Score = 100 bits (239), Expect = 3e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 255 NYMAEPITPATELEKNHHDMKAQMEMLIMRIQAEFCRALEKEEDKDAKFKVDRWLLKDGG 434
++MA P+T EL + DMK +ME+LI+ QA+ C+AL + D A F VDRW K+GG
Sbjct: 129 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALA-QVDGGANFSVDRWERKEGG 187
Query: 435 GGISCVLQDGRVFEKAGVNISVV 503
GGISCVLQDG VFEKAGV+ISVV
Sbjct: 188 GGISCVLQDGCVFEKAGVSISVV 210
>BC111799-1|AAI11800.1| 1690|Homo sapiens kinesin family member 1A
protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 SYVSAYKTIKDKPYKLYCAALIGTGYVAYTQHKHNKAQMKEILQLRNYMAEPITPATE-- 290
+YV+ K + + ++G +V H Q +E AEP+ A
Sbjct: 565 TYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQR 624
Query: 291 --LEKNHHDMKAQMEMLIMRIQAEFCRALEKEE 383
LEK DMK +ME + ++ ++ R E+EE
Sbjct: 625 ELLEKQGIDMKQEMEQRLQELEDQYRR--EREE 655
>BC111780-1|AAI11781.1| 1690|Homo sapiens kinesin family member 1A
protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 SYVSAYKTIKDKPYKLYCAALIGTGYVAYTQHKHNKAQMKEILQLRNYMAEPITPATE-- 290
+YV+ K + + ++G +V H Q +E AEP+ A
Sbjct: 565 TYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQR 624
Query: 291 --LEKNHHDMKAQMEMLIMRIQAEFCRALEKEE 383
LEK DMK +ME + ++ ++ R E+EE
Sbjct: 625 ELLEKQGIDMKQEMEQRLQELEDQYRR--EREE 655
>AC011298-1|AAX93239.1| 1690|Homo sapiens unknown protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 SYVSAYKTIKDKPYKLYCAALIGTGYVAYTQHKHNKAQMKEILQLRNYMAEPITPATE-- 290
+YV+ K + + ++G +V H Q +E AEP+ A
Sbjct: 565 TYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQR 624
Query: 291 --LEKNHHDMKAQMEMLIMRIQAEFCRALEKEE 383
LEK DMK +ME + ++ ++ R E+EE
Sbjct: 625 ELLEKQGIDMKQEMEQRLQELEDQYRR--EREE 655
>AB210029-1|BAE06111.1| 1478|Homo sapiens KIF1A variant protein
protein.
Length = 1478
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 SYVSAYKTIKDKPYKLYCAALIGTGYVAYTQHKHNKAQMKEILQLRNYMAEPITPATE-- 290
+YV+ K + + ++G +V H Q +E AEP+ A
Sbjct: 580 TYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQR 639
Query: 291 --LEKNHHDMKAQMEMLIMRIQAEFCRALEKEE 383
LEK DMK +ME + ++ ++ R E+EE
Sbjct: 640 ELLEKQGIDMKQEMEQRLQELEDQYRR--EREE 670
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,090,024
Number of Sequences: 237096
Number of extensions: 1609042
Number of successful extensions: 7179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7172
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -