Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_M05
         (406 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      62   2e-12
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          50   1e-08
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   3.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.0  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   9.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   9.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.3  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 62.5 bits (145), Expect = 2e-12
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +3

Query: 12  CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQARIS 158
           CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  +S
Sbjct: 53  CSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLS 101



 Score = 27.1 bits (57), Expect = 0.081
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +1

Query: 145 KQELASFIRTAEQLQVKGLT 204
           ++ L+SF++TAE L+V GLT
Sbjct: 97  QRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 49.6 bits (113), Expect = 1e-08
 Identities = 19/49 (38%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +3

Query: 12  CSPYFQEMFKMNPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQARI 155
           CS YFQ++   NP +HP + + +DV  + L+ +++F+Y+GE++V QA +
Sbjct: 57  CSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAEL 105


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query: 287 CLCCDDL-GPG 258
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 323 VSKSVSNLVITDCLCCDDLGPGLDVGF 243
           +S + S      CL CD++   LD  F
Sbjct: 316 ISSTPSQASSCSCLDCDEIRESLDTQF 342


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = -1

Query: 253 TSALVWMAWNFLHFDSRLNLSLEV 182
           T+ ++W+A+  L+F +  N++L +
Sbjct: 856 TTCVIWLAFVPLYFGTGNNVALRI 879


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 283 RQSVMTKLETDLDTKPSSTPVAVKRPNRPSI 375
           R  +    + +++TK   +P  +  PNR  I
Sbjct: 30  RTPIKNVYKNNIETKNQLSPFNIDTPNRQKI 60


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 229 WNFLHFDSRLNLSLEVVPRYE 167
           W+F   ++R+ L  E +PR E
Sbjct: 89  WDFFVKNARMILLEEYIPRVE 109


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 229 WNFLHFDSRLNLSLEVVPRYE 167
           W+F   ++R+ L  E +PR E
Sbjct: 63  WDFFVKNARMILLEEYIPRVE 83


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 171 YRGTTSSERFNRESK*RKFHAIQTKAD 251
           Y GT SSE    ++  R + A  +  D
Sbjct: 54  YSGTRSSESLTAQAHHRLYPAFSSSCD 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,544
Number of Sequences: 438
Number of extensions: 1258
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)