Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M02
(463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 41 6e-04
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 38 0.004
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 35 0.028
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 34 0.048
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 33 0.085
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 33 0.085
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 32 0.26
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 31 0.34
03_05_0468 - 24630701-24631399 30 1.0
11_04_0255 - 15422536-15422640,15422734-15422790,15422917-154230... 29 1.4
01_06_0246 + 27845898-27846001,27846235-27846237,27846472-278467... 29 1.4
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 29 1.8
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 29 2.4
03_06_0168 - 32122744-32122866,32123505-32123750 28 3.2
03_05_1053 - 29987908-29987985,29988096-29988152,29988229-299883... 28 3.2
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939... 28 3.2
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 28 3.2
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 28 4.2
01_05_0761 - 24984386-24984606,24984702-24984845,24986155-249863... 27 5.6
08_02_0527 + 18212938-18213257,18213352-18213991 27 7.3
10_05_0016 + 8030618-8030706,8030800-8030829,8031100-8031182,803... 27 9.7
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 27 9.7
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 27 9.7
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 161 DKRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADL 316
D R + + P PFGQ+P+L+ + +S AI+RY+ KY GADL
Sbjct: 39 DLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADL 90
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKY-----GLA-GADLEEDFEID 337
PE + PFG++P+LE QS AI+RY+ RKY GL G LEE +D
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVD 99
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYA-QSIAISRYLGRKYGLAGADL 316
PE + PFGQ+P + DG Y +S AI +Y+ RKY ADL
Sbjct: 44 PEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADL 86
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADL 316
PE + PFGQMP + +S A+ RY+ RKY + A+L
Sbjct: 44 PEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANL 86
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 33.5 bits (73), Expect = 0.085
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +2
Query: 146 GQEFEDKRISMDQWPEIKP----KTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG---LA 304
G E+E + M +P + PFGQ+P E +S AIS+Y+ RK+G L
Sbjct: 26 GAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLR 85
Query: 305 GADLEEDFEID 337
++L E +D
Sbjct: 86 ESNLSESAMVD 96
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 33.5 bits (73), Expect = 0.085
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADLEEDFEI 334
PE + PFG++P L+ +S AI++Y+ RKY + DL + +I
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDI 92
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.9 bits (69), Expect = 0.26
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGR---KYGLAGADLEEDFEIDQNVEF-L 355
PE P G++P+LE +S AI+RY+ R L G+ L + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126
Query: 356 NDIRAN 373
++ AN
Sbjct: 127 TEVDAN 132
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 134 LAYGGQEFE----DKRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRK 292
L G+++E D I+ + PE + PFGQ+P L+ +S AIS+Y+ RK
Sbjct: 21 LEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>03_05_0468 - 24630701-24631399
Length = 232
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 77 NVVFYYFPVKALGEGPRMLLAYGGQEFEDK--RISMDQWPEIKPKTPFGQMPLLEIDGKQ 250
+VV V G R+ LA G +E+K ++ + GQ+P+L + GK
Sbjct: 7 SVVLINCAVSMYGNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKP 66
Query: 251 YAQSIAISRYLGRKYGLAGADL 316
+S+ I ++ ++ G L
Sbjct: 67 VCESLVILEFIDEEFAGVGEPL 88
>11_04_0255 -
15422536-15422640,15422734-15422790,15422917-15423013,
15423155-15423222,15423299-15423344,15423467-15423621,
15423767-15423995,15424124-15424200,15425804-15425856,
15426082-15426139
Length = 314
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -2
Query: 201 GLISGHWSIDMRLSSNS--CP--P*ASNIRGPSPSAFT 100
GL+S HW + +R S N+ CP P ++ PSP T
Sbjct: 270 GLVSDHWHVGVRTSHNNSGCPSQPLLVLVQNPSPKVST 307
>01_06_0246 +
27845898-27846001,27846235-27846237,27846472-27846700,
27846814-27846968,27847091-27847136,27847233-27847324,
27847425-27847521,27847649-27847705,27847799-27847927
Length = 303
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -2
Query: 201 GLISGHWSIDMRLS--SNSCP--P*ASNIRGPSPSAFT 100
GL+S HW + +R S ++SCP P ++ PSP T
Sbjct: 251 GLVSDHWHVGVRTSHTNSSCPSQPLLVLVQNPSPKVST 288
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYA-QSIAISRYLGRKYG---LAGADLEEDFEID 337
P+ + PFGQ+P L+ DG + +S AI +Y+ RK L DL+E +D
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRKNKPELLKDGDLKESAMVD 96
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 203 KTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG----LAGADLEEDFEIDQNVE 349
++PFG++P E +S AI RY+ R Y L +LEE +D +E
Sbjct: 48 RSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWME 100
>03_06_0168 - 32122744-32122866,32123505-32123750
Length = 122
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 379 GGVCTNIVKELHVLINLEVFL*VCTSEAV 293
GGVC N+ K+L L+NLE+ ++ A+
Sbjct: 78 GGVCQNMGKKLGPLVNLEILAEALSNMAI 106
>03_05_1053 -
29987908-29987985,29988096-29988152,29988229-29988344,
29988900-29989038,29989430-29989558,29990218-29990325,
29990418-29990645
Length = 284
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +2
Query: 275 RYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDEAVKAKKLAEFRET 442
R+L R YGL D E+D E + E D R +G E ++A AK AE RET
Sbjct: 55 RFLER-YGLNPDDFEDDAEAEPREERRRDRRNRRSG-RGEAEDA-PAKAAAEPRET 107
>02_02_0359 -
9390175-9390416,9390924-9391044,9391069-9391410,
9392400-9392759
Length = 354
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 311 DLEEDFEIDQNVEFLNDIRANAAGVHYEKDEAVKAKKLAEFRETKYQFLIE 463
DLEE E V+ +AA E+ V A +LAE + KY+ + E
Sbjct: 111 DLEEHLEFLHTVQSQQRAEQDAAIARLEQSRLVLAMRLAEHQGKKYRVIDE 161
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKY 295
P+ + PFGQ+P + +S AI RY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = -3
Query: 341 SDQSRSLPLGLHQRGRTCDRGTC*WRCSERTVYR-QFPTTAFDRTGSWA*FQAIGPLICV 165
S S S L HQ G++C T + C E + + F G W ++C+
Sbjct: 139 SSASSSERLKAHQSGKSCKELTGLYMCQEIMAHEGSIWSIKFSTNGRWLASAGKDHVVCI 198
Query: 164 CLRIPARRRLATSADPRRAP 105
L + A + D P
Sbjct: 199 WLVVEASSQACLPNDSNSGP 218
>01_05_0761 -
24984386-24984606,24984702-24984845,24986155-24986393,
24986601-24986704,24987046-24987120,24987257-24987304,
24988836-24988880
Length = 291
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 251 YAQSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAG-VHYEK 397
+ Q + Y R YG A + + DF + F+N R AG H+EK
Sbjct: 53 FIQELGPGSYKSRVYGRALSGGDVDFRTRVLLAFINCARGRTAGAAHHEK 102
>08_02_0527 + 18212938-18213257,18213352-18213991
Length = 319
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 200 PKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGA 310
P TP + P + +Q QS++ S YGL GA
Sbjct: 224 PLTPENRAPAPPLQQQQQQQSVSASPVASDSYGLGGA 260
>10_05_0016 +
8030618-8030706,8030800-8030829,8031100-8031182,
8031321-8031479,8031520-8031635
Length = 158
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 174 QWTNGLKSSPRPRSVKCRCWKLTVNS 251
Q T G SP ++V+CRCW L + +
Sbjct: 23 QQTTGQLISPA-KNVRCRCWMLMIGT 47
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 119 GPRMLLAYGGQEFEDKRISMDQWPEIKPKTPFGQMPLLE 235
G R+++AYGG + +++ EI TP M LLE
Sbjct: 343 GVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLE 381
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYL 283
PE P G++P+LE +S AI+RY+
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYV 74
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 188 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYL 283
PE P G++P+LE +S AI+RY+
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYV 635
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,189,468
Number of Sequences: 37544
Number of extensions: 251283
Number of successful extensions: 764
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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