BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_M02
(463 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF513639-1|AAM53611.1| 195|Anopheles gambiae glutathione S-tran... 125 7e-31
L07880-1|AAA29358.1| 218|Anopheles gambiae glutathione S-transf... 120 3e-29
Z81291-1|CAB03592.1| 209|Anopheles gambiae GSTD1-5 protein prot... 31 0.026
Z71481-1|CAA96105.1| 140|Anopheles gambiae GSTD2 protein protein. 31 0.026
AF071160-3|AAC79993.1| 209|Anopheles gambiae glutathione S-tran... 31 0.026
Z81292-1|CAB03593.1| 209|Anopheles gambiae GSTD1-6 protein prot... 30 0.034
AF316636-1|AAG45164.1| 221|Anopheles gambiae glutathione S-tran... 30 0.034
AF071160-1|AAC79995.1| 209|Anopheles gambiae glutathione S-tran... 30 0.034
AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione S-tran... 29 0.060
AF316635-1|AAG45163.1| 224|Anopheles gambiae glutathione S-tran... 29 0.060
AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione transf... 29 0.10
AF515522-1|AAM61889.1| 222|Anopheles gambiae glutathione S-tran... 28 0.14
AF071162-1|AAC79998.1| 216|Anopheles gambiae glutathione S-tran... 28 0.14
AF071160-2|AAC79994.1| 216|Anopheles gambiae glutathione S-tran... 28 0.14
AF513637-1|AAM53609.1| 214|Anopheles gambiae glutathione S-tran... 27 0.32
AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione S-tran... 26 0.56
AF071163-1|AAC79999.1| 218|Anopheles gambiae glutathione S-tran... 26 0.56
AF071161-1|AAC79997.1| 218|Anopheles gambiae glutathione S-tran... 26 0.56
AF071160-4|AAC79992.1| 218|Anopheles gambiae glutathione S-tran... 26 0.56
AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione S-tran... 26 0.74
AY035716-1|AAK61362.1| 136|Anopheles gambiae histone 3A protein. 24 2.3
AY070254-1|AAL59653.1| 225|Anopheles gambiae glutathione S-tran... 24 3.0
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 24 3.0
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 23 3.9
DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein. 23 6.9
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 22 9.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 22 9.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 22 9.1
AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450 CY... 22 9.1
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 9.1
>AF513639-1|AAM53611.1| 195|Anopheles gambiae glutathione
S-transferase S1-2 protein.
Length = 195
Score = 125 bits (302), Expect = 7e-31
Identities = 61/123 (49%), Positives = 79/123 (64%)
Frame = +2
Query: 95 FPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAIS 274
F VKALGE R LL+YG F+D RI+ ++WP +KP P GQMP+LE+DGK+ QS+A+S
Sbjct: 1 FNVKALGEPLRFLLSYGNLPFDDVRITREEWPALKPTMPMGQMPVLEVDGKKVHQSVAMS 60
Query: 275 RYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDEAVKAKKLAEFRETKYQF 454
RYL + GLAGAD E+ ID V+ +ND R A V YE D+ +K KKL F
Sbjct: 61 RYLANQVGLAGADDWENLMIDTVVDTVNDFRLKIAVVSYEPDDEIKEKKLVTLNNEVIPF 120
Query: 455 LIE 463
+E
Sbjct: 121 YLE 123
>L07880-1|AAA29358.1| 218|Anopheles gambiae glutathione
S-transferase protein.
Length = 218
Score = 120 bits (288), Expect = 3e-29
Identities = 58/130 (44%), Positives = 80/130 (61%)
Frame = +2
Query: 71 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPKTPFGQMPLLEIDGKQ 250
MP+ YYF VKALGE R LL+YG F+D RI+ ++WP +KP P QMP+LE+DGK+
Sbjct: 16 MPDYKVYYFNVKALGEPLRFLLSYGNLPFDDVRITREEWPALKPTMPMRQMPVLEVDGKR 75
Query: 251 YAQSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDEAVKAKKLAE 430
QS+A+ RY+ ++ LAG + E +ID V+ +ND R A V YE D+ VK KK+
Sbjct: 76 VHQSLAMCRYVAKQINLAGDNPLEALQIDAIVDTINDFRLKIAIVAYEPDDMVKEKKMVT 135
Query: 431 FRETKYQFLI 460
F +
Sbjct: 136 LNNEVIPFYL 145
>Z81291-1|CAB03592.1| 209|Anopheles gambiae GSTD1-5 protein
protein.
Length = 209
Score = 30.7 bits (66), Expect = 0.026
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L +G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKINPQHCIPTLVDNGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAICTYLAEKYG 77
>Z71481-1|CAA96105.1| 140|Anopheles gambiae GSTD2 protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 0.026
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L +G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGAELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAIQIYLAEKYG 77
>AF071160-3|AAC79993.1| 209|Anopheles gambiae glutathione
S-transferase protein.
Length = 209
Score = 30.7 bits (66), Expect = 0.026
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L +G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKINPQHCIPTLVDNGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAICTYLAEKYG 77
>Z81292-1|CAB03593.1| 209|Anopheles gambiae GSTD1-6 protein
protein.
Length = 209
Score = 30.3 bits (65), Expect = 0.034
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L +G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAIQIYLAEKYG 77
>AF316636-1|AAG45164.1| 221|Anopheles gambiae glutathione
S-transferase E2 protein.
Length = 221
Score = 30.3 bits (65), Expect = 0.034
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 71 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEI 238
M N+V Y + + G E E K I++ +KP+ P +P+L+
Sbjct: 1 MSNLVLYTLHLSPPCRAVELTAKALGLELEQKTINLLTGDHLKPEFVKLNPQHTIPVLDD 60
Query: 239 DGKQYAQSIAISRYLGRKYG 298
+G +S AI YL KYG
Sbjct: 61 NGTIITESHAIMIYLVTKYG 80
>AF071160-1|AAC79995.1| 209|Anopheles gambiae glutathione
S-transferase protein.
Length = 209
Score = 30.3 bits (65), Expect = 0.034
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L +G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAIQIYLAEKYG 77
>AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.060
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 71 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISM----DQWPEIKPKTPFGQMPLLEI 238
MP V Y + + G E E K +++ + PE P +P+L+
Sbjct: 1 MPKPVLYTVRLSPPCRAVELTAKALGLELERKLVNLLAGQNLTPEFLKLNPKHTIPVLDD 60
Query: 239 DGKQYAQSIAISRYLGRKYG 298
+G ++S AI YL RKYG
Sbjct: 61 NGTIISESHAIMIYLVRKYG 80
>AF316635-1|AAG45163.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.060
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 71 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISM----DQWPEIKPKTPFGQMPLLEI 238
MP V Y + + G E E K +++ + PE P +P+L+
Sbjct: 1 MPKPVLYTVHLSPPCRAVELTAKALGLELERKLVNLLAGENLTPEFLKLNPKHTIPVLDD 60
Query: 239 DGKQYAQSIAISRYLGRKYG 298
+G ++S AI YL RKYG
Sbjct: 61 NGTIISESHAIMIYLVRKYG 80
>AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione
transferase o1 protein.
Length = 248
Score = 28.7 bits (61), Expect = 0.10
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +2
Query: 170 ISMDQWPE-IKPKTPFGQMPLLEIDGKQ---YAQSIAISRYLGRKY 295
I++ + PE K P G++P LEI GK+ +S+ +S Y+ Y
Sbjct: 52 INLSEKPEWYLEKNPLGKVPALEIPGKEGVTLYESLVLSDYIEEAY 97
>AF515522-1|AAM61889.1| 222|Anopheles gambiae glutathione
S-transferase protein.
Length = 222
Score = 28.3 bits (60), Expect = 0.14
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 191 EIKPKTPFGQMPLLEIDGKQYAQSIAISRYL 283
E + P Q+P L+IDG +S++I YL
Sbjct: 55 EYREVNPMEQVPALQIDGHTLIESVSIMYYL 85
>AF071162-1|AAC79998.1| 216|Anopheles gambiae glutathione
S-transferase D1-4 protein.
Length = 216
Score = 28.3 bits (60), Expect = 0.14
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCVPTLVDSGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAIMCYLVEKYG 77
>AF071160-2|AAC79994.1| 216|Anopheles gambiae glutathione
S-transferase protein.
Length = 216
Score = 28.3 bits (60), Expect = 0.14
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FYY P A +M A G E K + + +KP+ P +P L G
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCVPTLVDSGFAL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAIMCYLVEKYG 77
>AF513637-1|AAM53609.1| 214|Anopheles gambiae glutathione
S-transferase D11 protein.
Length = 214
Score = 27.1 bits (57), Expect = 0.32
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQY 253
FY+ P+ A + R+L G K + + + +KP+ P +P L +
Sbjct: 3 FYHLPLSAPCQSIRLLAKALGLHLNLKEVDLLKGEHLKPEFLKINPQHTVPTLVDNDFVL 62
Query: 254 AQSIAISRYLGRKYG 298
+S AI YL KYG
Sbjct: 63 WESRAILTYLCEKYG 77
>AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione
S-transferase u1 protein.
Length = 233
Score = 26.2 bits (55), Expect = 0.56
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 191 EIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKY 295
E + P ++P+L+ DG ++S AI +YL KY
Sbjct: 42 EYEKMNPQKEIPVLDDDGFFLSESNAILQYLCEKY 76
>AF071163-1|AAC79999.1| 218|Anopheles gambiae glutathione
S-transferase D1-3 protein.
Length = 218
Score = 26.2 bits (55), Expect = 0.56
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMP-LLEIDGKQ 250
FYY P A +M A G E K + + +KP+ P +P L++ DG
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDEDGFV 62
Query: 251 YAQSIAISRYLGRKY 295
+S AI YL KY
Sbjct: 63 LWESRAIQIYLVEKY 77
>AF071161-1|AAC79997.1| 218|Anopheles gambiae glutathione
S-transferase D7 protein.
Length = 218
Score = 26.2 bits (55), Expect = 0.56
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Frame = +2
Query: 83 VFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMPLLEIDGKQ 250
V YY P +L G E E K +++ + ++KP P +P L+ G
Sbjct: 4 VLYYLPPSPPCRSVLLLAKMIGVELELKALNVMEGEQLKPDFVELNPQHCIPTLDDHGLV 63
Query: 251 YAQSIAISRYLGRKYGLAGADLEEDFE----IDQNVEF 352
+S I YL YG +DF +DQ + F
Sbjct: 64 LWESRVILAYLVSAYGKDENLYPKDFRSRAIVDQRLHF 101
>AF071160-4|AAC79992.1| 218|Anopheles gambiae glutathione
S-transferase protein.
Length = 218
Score = 26.2 bits (55), Expect = 0.56
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +2
Query: 86 FYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK----TPFGQMP-LLEIDGKQ 250
FYY P A +M A G E K + + +KP+ P +P L++ DG
Sbjct: 3 FYYLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDEDGFV 62
Query: 251 YAQSIAISRYLGRKY 295
+S AI YL KY
Sbjct: 63 LWESRAIQIYLVEKY 77
>AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione
S-transferase protein.
Length = 229
Score = 25.8 bits (54), Expect = 0.74
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 191 EIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKY 295
E K F ++P + + A+S+AI RYL R+Y
Sbjct: 46 EFKAINRFQKVPCITDSQIKLAESVAIFRYLCREY 80
>AY035716-1|AAK61362.1| 136|Anopheles gambiae histone 3A protein.
Length = 136
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 146 RRRLATSADPRRAPSRGNSKK 84
R++LAT A + APS G KK
Sbjct: 18 RKQLATKAARKSAPSTGGVKK 38
>AY070254-1|AAL59653.1| 225|Anopheles gambiae glutathione
S-transferase E4 protein.
Length = 225
Score = 23.8 bits (49), Expect = 3.0
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 71 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISM---DQWPEIKPK-TPFGQMPLLEI 238
MPN+ Y + G + G E + I++ + E K P +PL++
Sbjct: 1 MPNIKLYTAKLSPPGRSVELTAKALGLELDIVPINLLAQEHLTEAFRKLNPQHTIPLIDD 60
Query: 239 DGKQYAQSIAISRYLGRKYGLAGAD 313
+G S AI+ YL KYG D
Sbjct: 61 NGTIVWDSHAINVYLVSKYGKPEGD 85
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 23.8 bits (49), Expect = 3.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 46 EDNFIKTNNAERSFLLFPREGARR 117
EDN I N RSF F RE R
Sbjct: 116 EDNLIDENRYARSFRHFTREALPR 139
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 23.4 bits (48), Expect = 3.9
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 98 PVKALGEGPRMLLAYGGQEFEDKRISMDQWPE-IKPKTPFGQMPLLEIDGKQYAQSIAIS 274
P K + + +AYGGQE + + + + I GQ+PL + G + +
Sbjct: 43 PAKVIPDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEIL- 101
Query: 275 RYLGRKY 295
Y+GR Y
Sbjct: 102 -YVGRAY 107
>DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein.
Length = 391
Score = 22.6 bits (46), Expect = 6.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 293 YGLAGADLEEDFEI 334
Y LAGA ++EDF++
Sbjct: 63 YPLAGAAVQEDFQV 76
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.2 bits (45), Expect = 9.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 310 CTSEAVLATEVPADGDALSVLFTVNFQQRHLTERGLGLDFRPL 182
C +E + T ADG LS T+ + H + + F PL
Sbjct: 1432 CYAEMTIDTTHTADGSKLSFNITIKPSESHTSIDVDHVRFSPL 1474
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 22.2 bits (45), Expect = 9.1
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +2
Query: 284 GRKYGLAGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDE 403
G+ + + G + F Q ++FL ++ G +YE ++
Sbjct: 1761 GKSFAIDGP-FAQHFNSIQGIDFLTNLFPTQDGFYYESEQ 1799
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 22.2 bits (45), Expect = 9.1
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +2
Query: 284 GRKYGLAGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDE 403
G+ + + G + F Q ++FL ++ G +YE ++
Sbjct: 1762 GKSFAIDGR-FAQHFSSIQGIDFLTNLFPTQDGFYYESEQ 1800
>AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450
CYP6M1 protein.
Length = 503
Score = 22.2 bits (45), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 22 RAFVFQIFEDNFIKTNNAERSFLLFPREG 108
+ F F +E I SF+L PREG
Sbjct: 462 QGFSFAPYEKTSIPMKFITNSFILGPREG 490
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 9.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 302 AGADLEEDFEIDQNVEFLNDIRANAAGVHYEKDEAVKA 415
A + ++ E+ NVE N+ V E+DE V A
Sbjct: 1335 ANVENAKENEVAANVENQNEDEVQPMEVEEERDEGVAA 1372
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,993
Number of Sequences: 2352
Number of extensions: 9146
Number of successful extensions: 70
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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