Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L24
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.1  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   3.7  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   6.5  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   8.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 106 DLLPNEVNGWFWTAELQK 159
           D+  N VN W WT  +++
Sbjct: 63  DVAYNNVNNWLWTPFIER 80


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 118 NEVNGWFWTAELQKLA 165
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 268 CVAILNNFYNDGVHWHDVACHHVKPFVCEEND 363
           C+    N Y+DG ++++V    +     +EN+
Sbjct: 65  CLIKKFNAYDDGGNFNEVVVREIAEIYLDENE 96


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 310 WHDVACHHVKPFVCEENDALLKYVRYTNP 396
           W  +  HH    VC  ND  +     T+P
Sbjct: 122 WLQMTKHHNFIKVCSVNDVNMTITELTDP 150


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 268 CVAILNNFYNDGVHWHDVACHHVKPFVCEEN 360
           C+    N Y+DG ++++V    +     +EN
Sbjct: 65  CLIKKFNGYDDGGNFNEVVIREIAEIFLDEN 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,104
Number of Sequences: 438
Number of extensions: 2509
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)